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  5. Bradi1g31710

Bradi1g31710


Description : GTP-binding family protein


Gene families : OG_42_0003992 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003992_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g31710
Cluster HCCA clusters: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
A4A49_05864 No alias guanine nucleotide-binding protein-like nsn1 0.02 Orthogroups_2024-Update
Brara.A03628.1 No alias regulatory GTPase (NUG1/NSN1) of LSU processome 0.1 Orthogroups_2024-Update
Brara.C03191.1 No alias regulatory GTPase (NUG1/NSN1) of LSU processome 0.11 Orthogroups_2024-Update
Brara.E03243.1 No alias regulatory GTPase (NUG1/NSN1) of LSU processome 0.04 Orthogroups_2024-Update
Cre12.g533050 No alias GTP-binding family protein 0.14 Orthogroups_2024-Update
Glyma.10G122200 No alias GTP-binding family protein 0.07 Orthogroups_2024-Update
HORVU2Hr1G016650.1 No alias regulatory GTPase (NUG1/NSN1) of LSU processome 0.14 Orthogroups_2024-Update
Kfl00223_0170 kfl00223_0170_v1.... (at3g07050 : 427.0) GTP-binding family protein;... 0.08 Orthogroups_2024-Update
Mp8g17210.1 No alias NUG1/NSN1 LSU processome regulatory GTPase 0.04 Orthogroups_2024-Update
PSME_00016702-RA No alias (at3g07050 : 452.0) GTP-binding family protein;... 0.02 Orthogroups_2024-Update
Potri.002G241100 No alias GTP-binding family protein 0.06 Orthogroups_2024-Update
Pp1s91_142V6 No alias guanine nucleotide binding protein 3 0.1 Orthogroups_2024-Update
Seita.9G087300.1 No alias regulatory GTPase (NUG1/NSN1) of LSU processome 0.16 Orthogroups_2024-Update
Sobic.001G177100.1 No alias regulatory GTPase (NUG1/NSN1) of LSU processome 0.11 Orthogroups_2024-Update
Solyc06g083520 No alias GTP-binding family protein (AHRD V3.3 *** A0A061DNE0_THECC) 0.06 Orthogroups_2024-Update
Solyc09g061430 No alias nuclear GTPase DQ304482 0.07 Orthogroups_2024-Update
Sopen06g034900 No alias 50S ribosome-binding GTPase 0.12 Orthogroups_2024-Update
Sopen09g024250 No alias GNL3L/Grn1 putative GTPase 0.07 Orthogroups_2024-Update
evm.model.contig_2299.5 No alias (at3g07050 : 275.0) GTP-binding family protein;... 0.1 Orthogroups_2024-Update
evm.model.tig00001215.14 No alias (at3g07050 : 206.0) GTP-binding family protein;... 0.12 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004637 phosphoribosylamine-glycine ligase activity IEP Predicted GO
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006144 purine nucleobase metabolic process IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0009112 nucleobase metabolic process IEP Predicted GO
BP GO:0009113 purine nucleobase biosynthetic process IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0046112 nucleobase biosynthetic process IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR014813 Gnl3_N_dom 16 92
IPR006073 GTP_binding_domain 273 341
No external refs found!