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  5. Bradi1g38120

Bradi1g38120


Description : protodermal factor 1


Gene families : OG_42_0002810 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002810_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g38120
Cluster HCCA clusters: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
Glyma.02G280550 No alias protodermal factor 1 0.02 Orthogroups_2024-Update
Glyma.14G027551 No alias protodermal factor 1 0.04 Orthogroups_2024-Update
Glyma.18G106400 No alias protodermal factor 1 0.04 Orthogroups_2024-Update
LOC_Os01g10490 No alias keratin, type I cytoskeletal 9, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g35970 No alias meiosis 5, putative, expressed 0.03 Orthogroups_2024-Update
Potri.005G200900 No alias protodermal factor 1 0.02 Orthogroups_2024-Update
Seita.1G026600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.4G180600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc12g011010 No alias protodermal factor 1 (AHRD V3.3 *-* AT2G42840.1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
CC GO:0031226 intrinsic component of plasma membrane IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
CC GO:0046658 anchored component of plasma membrane IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!