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  5. Sopen06g024540

Sopen06g024540


Description : DEAD/DEAH box helicase


Gene families : OG_42_0003368 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003368_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen06g024540
Cluster HCCA clusters: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
Brara.B00396.1 No alias helicase UAP56 0.03 Orthogroups_2024-Update
Brara.C00453.1 No alias helicase UAP56 0.03 Orthogroups_2024-Update
Glyma.04G067600 No alias DEAD/DEAH box RNA helicase family protein 0.03 Orthogroups_2024-Update
Mp1g02350.1 No alias RNA helicase (Sub2). helicase component UAP56 of... 0.02 Orthogroups_2024-Update
Sobic.009G257600.1 No alias helicase UAP56 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 72 237
IPR001650 Helicase_C 277 384
No external refs found!