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  5. Bradi1g50270

Bradi1g50270


Description : chaperonin 60 beta


Gene families : OG_42_0000358 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000358_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g50270
Cluster HCCA clusters: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
165043 No alias TCP-1/cpn60 chaperonin family protein 0.02 Orthogroups_2024-Update
168153 No alias chaperonin 60 beta 0.02 Orthogroups_2024-Update
405358 No alias heat shock protein 60 0.05 Orthogroups_2024-Update
A4A49_39526 No alias chaperonin 60 subunit beta 4, chloroplastic 0.03 Orthogroups_2024-Update
AC215201.3_FG005 No alias chaperonin-60alpha 0.02 Orthogroups_2024-Update
At2g28000 No alias SLP [Source:UniProtKB/TrEMBL;Acc:A0A178VZW6] 0.05 Orthogroups_2024-Update
At2g33210 No alias Chaperonin CPN60-like 1, mitochondrial... 0.07 Orthogroups_2024-Update
At3g13470 No alias Chaperonin 60 subunit beta 2, chloroplastic... 0.03 Orthogroups_2024-Update
At3g13860 No alias Chaperonin CPN60-like 2, mitochondrial... 0.03 Orthogroups_2024-Update
At3g23990 No alias Chaperonin CPN60, mitochondrial... 0.02 Orthogroups_2024-Update
At5g18820 No alias Chaperonin 60 subunit alpha 2, chloroplastic... 0.05 Orthogroups_2024-Update
Brara.B00789.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.05 Orthogroups_2024-Update
Brara.C03936.1 No alias chaperone *(Hsp60) 0.04 Orthogroups_2024-Update
Brara.D01674.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.04 Orthogroups_2024-Update
Brara.E01070.1 No alias chaperone *(Hsp60) 0.03 Orthogroups_2024-Update
Brara.E01461.1 No alias chaperone *(Hsp60) & subunit beta of Cpn60 chaperonin... 0.07 Orthogroups_2024-Update
Brara.G01341.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.08 Orthogroups_2024-Update
Cre04.g231222 No alias chaperonin-60alpha 0.02 Orthogroups_2024-Update
Cre06.g309100 No alias heat shock protein 60 0.02 Orthogroups_2024-Update
Cre07.g339150 No alias TCP-1/cpn60 chaperonin family protein 0.01 Orthogroups_2024-Update
Cre17.g741450 No alias chaperonin 60 beta 0.04 Orthogroups_2024-Update
GRMZM2G015989 No alias chaperonin 60 beta 0.04 Orthogroups_2024-Update
GRMZM2G074790 No alias heat shock protein 60-3A 0.03 Orthogroups_2024-Update
GRMZM2G083716 No alias chaperonin 60 beta 0.03 Orthogroups_2024-Update
GRMZM2G416120 No alias heat shock protein 60 0.03 Orthogroups_2024-Update
Glyma.08G192700 No alias heat shock protein 60-3A 0.02 Orthogroups_2024-Update
Glyma.10G127800 No alias heat shock protein 60 0.04 Orthogroups_2024-Update
HORVU0Hr1G038830.19 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.03 Orthogroups_2024-Update
HORVU1Hr1G038680.8 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G007840.7 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.06 Orthogroups_2024-Update
HORVU7Hr1G006490.2 No alias chaperone *(Hsp60) & subunit beta of CPN60 assembly... 0.03 Orthogroups_2024-Update
Kfl00292_0140 kfl00292_0140_v1.1 (q05046|ch62_cucma : 837.0) Chaperonin CPN60-2,... 0.01 Orthogroups_2024-Update
LOC_Os09g38980 No alias T-complex protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g17910 No alias T-complex protein, putative, expressed 0.06 Orthogroups_2024-Update
MA_97627g0010 No alias (p08927|rubb_pea : 646.0) RuBisCO large subunit-binding... 0.05 Orthogroups_2024-Update
PSME_00000058-RA No alias (at3g13470 : 709.0) TCP-1/cpn60 chaperonin family... 0.02 Orthogroups_2024-Update
PSME_00000537-RA No alias (p21239|rub1_brana : 764.0) RuBisCO large... 0.03 Orthogroups_2024-Update
PSME_00008710-RA No alias (q05046|ch62_cucma : 823.0) Chaperonin CPN60-2,... 0.02 Orthogroups_2024-Update
Potri.001G002500 No alias TCP-1/cpn60 chaperonin family protein 0.03 Orthogroups_2024-Update
Potri.001G054400 No alias heat shock protein 60 0.02 Orthogroups_2024-Update
Potri.003G222400 No alias TCP-1/cpn60 chaperonin family protein 0.03 Orthogroups_2024-Update
Potri.004G213400 No alias chaperonin-60alpha 0.03 Orthogroups_2024-Update
Pp1s114_95V6 No alias rubisco subunit binding-protein alpha subunit 0.05 Orthogroups_2024-Update
Pp1s149_289V6 No alias -like atpase 0.03 Orthogroups_2024-Update
Pp1s14_298V6 No alias ru large subunit-binding protein subunit beta 0.04 Orthogroups_2024-Update
Pp1s16_322V6 No alias rubisco subunit binding-protein alpha subunit 0.02 Orthogroups_2024-Update
Seita.2G129300.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.02 Orthogroups_2024-Update
Seita.3G283900.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.15 Orthogroups_2024-Update
Seita.4G010900.1 No alias chaperone *(Hsp60) & subunit beta of Cpn60 chaperonin... 0.12 Orthogroups_2024-Update
Seita.7G110500.1 No alias subunit beta of Cpn60 chaperonin complex & subunit beta... 0.06 Orthogroups_2024-Update
Sobic.001G437801.1 No alias subunit beta of CPN60 assembly chaperone heterodimer &... 0.03 Orthogroups_2024-Update
Sobic.002G131000.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.03 Orthogroups_2024-Update
Sobic.009G098100.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.11 Orthogroups_2024-Update
Sobic.010G011200.1 No alias chaperone *(Hsp60) & subunit beta of CPN60 assembly... 0.06 Orthogroups_2024-Update
Solyc01g028810 No alias Chaperonin-60 beta subunit (AHRD V3.3 *** P93570_SOLTU) 0.03 Orthogroups_2024-Update
Solyc03g120850 No alias Chaperonin-60 beta subunit (AHRD V3.3 *** P93570_SOLTU) 0.1 Orthogroups_2024-Update
Solyc11g069790 No alias Chaperonin 60 alpha subunit (AHRD V3.3 *** Q9ZTV1_CANLI) 0.06 Orthogroups_2024-Update
Sopen01g016850 No alias TCP-1/cpn60 chaperonin family 0.04 Orthogroups_2024-Update
Sopen03g039670 No alias TCP-1/cpn60 chaperonin family 0.03 Orthogroups_2024-Update
Sopen03g040450 No alias TCP-1/cpn60 chaperonin family 0.04 Orthogroups_2024-Update
Sopen09g034150 No alias TCP-1/cpn60 chaperonin family 0.03 Orthogroups_2024-Update
Sopen11g028490 No alias TCP-1/cpn60 chaperonin family 0.03 Orthogroups_2024-Update
evm.model.contig_3433.6 No alias (at1g55490 : 394.0) encodes the beta subunit of the... 0.01 Orthogroups_2024-Update
evm.model.contig_4417.1 No alias (at2g28000 : 575.0) Encodes chaperonin-60 alpha, a... 0.01 Orthogroups_2024-Update
evm.model.contig_552.1 No alias (q05046|ch62_cucma : 684.0) Chaperonin CPN60-2,... 0.01 Orthogroups_2024-Update
evm.model.tig00001107.20 No alias (q42694|ruba_chlre : 473.0) RuBisCO large... 0.01 Orthogroups_2024-Update
evm.model.tig00001269.7 No alias (q05046|ch62_cucma : 728.0) Chaperonin CPN60-2,... 0.02 Orthogroups_2024-Update
evm.model.tig00020943.69 No alias (p08823|ruba_wheat : 426.0) RuBisCO large... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Predicted GO
MF GO:0004418 hydroxymethylbilane synthase activity IEP Predicted GO
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Predicted GO
MF GO:0004455 ketol-acid reductoisomerase activity IEP Predicted GO
MF GO:0004655 porphobilinogen synthase activity IEP Predicted GO
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
MF GO:0004817 cysteine-tRNA ligase activity IEP Predicted GO
MF GO:0004820 glycine-tRNA ligase activity IEP Predicted GO
MF GO:0004827 proline-tRNA ligase activity IEP Predicted GO
MF GO:0004832 valine-tRNA ligase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006426 glycyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006433 prolyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006438 valyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006553 lysine metabolic process IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008175 tRNA methyltransferase activity IEP Predicted GO
MF GO:0008312 7S RNA binding IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009081 branched-chain amino acid metabolic process IEP Predicted GO
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Predicted GO
BP GO:0009085 lysine biosynthetic process IEP Predicted GO
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046451 diaminopimelate metabolic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
CC GO:0048500 signal recognition particle IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
MF GO:0061505 DNA topoisomerase II activity IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 77 580
No external refs found!