Bradi1g53840


Description : SU(VAR)3-9 homolog 1


Gene families : OG_42_0000288 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000288_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g53840
Cluster HCCA clusters: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
Brara.G02332.1 No alias methylated DNA binding component *(SUVH1/3) of SUVH-DNAJ... 0.03 Orthogroups_2024-Update
GRMZM2G025924 No alias SU(VAR)3-9 homolog 2 0.03 Orthogroups_2024-Update
GRMZM2G054380 No alias SU(VAR)3-9 homolog 4 0.03 Orthogroups_2024-Update
GRMZM2G336909 No alias SU(VAR)3-9 homolog 4 0.02 Orthogroups_2024-Update
Glyma.11G038000 No alias SU(VAR)3-9 homolog 6 0.03 Orthogroups_2024-Update
PSME_00021046-RA No alias (at5g13960 : 630.0) Encodes a histone 3 lysine 9... 0.05 Orthogroups_2024-Update
Pp1s456_7V6 No alias set domain protein 0.02 Orthogroups_2024-Update
Solyc12g096990 No alias Histone-lysine N-methyltransferase (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen09g030920 No alias SAD/SRA domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
MF GO:0018024 histone-lysine N-methyltransferase activity IEA InterProScan predictions
BP GO:0034968 histone lysine methylation IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
BP GO:0000075 cell cycle checkpoint IEP Predicted GO
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
CC GO:0005801 cis-Golgi network IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0007030 Golgi organization IEP Predicted GO
BP GO:0007088 regulation of mitotic nuclear division IEP Predicted GO
BP GO:0007093 mitotic cell cycle checkpoint IEP Predicted GO
BP GO:0007094 mitotic spindle assembly checkpoint IEP Predicted GO
BP GO:0007346 regulation of mitotic cell cycle IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
BP GO:0009452 7-methylguanosine RNA capping IEP Predicted GO
BP GO:0010564 regulation of cell cycle process IEP Predicted GO
BP GO:0010639 negative regulation of organelle organization IEP Predicted GO
BP GO:0010948 negative regulation of cell cycle process IEP Predicted GO
BP GO:0010965 regulation of mitotic sister chromatid separation IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP Predicted GO
BP GO:0031577 spindle checkpoint IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0033043 regulation of organelle organization IEP Predicted GO
BP GO:0033044 regulation of chromosome organization IEP Predicted GO
BP GO:0033045 regulation of sister chromatid segregation IEP Predicted GO
BP GO:0033046 negative regulation of sister chromatid segregation IEP Predicted GO
BP GO:0033047 regulation of mitotic sister chromatid segregation IEP Predicted GO
BP GO:0033048 negative regulation of mitotic sister chromatid segregation IEP Predicted GO
BP GO:0036260 RNA capping IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
BP GO:0043085 positive regulation of catalytic activity IEP Predicted GO
BP GO:0044093 positive regulation of molecular function IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0045786 negative regulation of cell cycle IEP Predicted GO
BP GO:0045839 negative regulation of mitotic nuclear division IEP Predicted GO
BP GO:0045841 negative regulation of mitotic metaphase/anaphase transition IEP Predicted GO
BP GO:0045930 negative regulation of mitotic cell cycle IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051128 regulation of cellular component organization IEP Predicted GO
BP GO:0051129 negative regulation of cellular component organization IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0051783 regulation of nuclear division IEP Predicted GO
BP GO:0051784 negative regulation of nuclear division IEP Predicted GO
BP GO:0051983 regulation of chromosome segregation IEP Predicted GO
BP GO:0051985 negative regulation of chromosome segregation IEP Predicted GO
BP GO:0071173 spindle assembly checkpoint IEP Predicted GO
BP GO:0071174 mitotic spindle checkpoint IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901987 regulation of cell cycle phase transition IEP Predicted GO
BP GO:1901988 negative regulation of cell cycle phase transition IEP Predicted GO
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP Predicted GO
BP GO:1901991 negative regulation of mitotic cell cycle phase transition IEP Predicted GO
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP Predicted GO
BP GO:1902100 negative regulation of metaphase/anaphase transition of cell cycle IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
BP GO:1905818 regulation of chromosome separation IEP Predicted GO
BP GO:1905819 negative regulation of chromosome separation IEP Predicted GO
BP GO:2000816 negative regulation of mitotic sister chromatid separation IEP Predicted GO
BP GO:2001251 negative regulation of chromosome organization IEP Predicted GO
InterPro domains Description Start Stop
IPR001214 SET_dom 691 820
IPR007728 Pre-SET_dom 573 672
IPR003105 SRA_YDG 397 545
No external refs found!