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  5. Bradi1g55620

Bradi1g55620


Description : Chlorophyll A-B binding family protein


Gene families : OG_42_0000421 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000421_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g55620
Cluster HCCA clusters: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
A4A49_24316 No alias early light-induced protein 1, chloroplastic 0.04 Orthogroups_2024-Update
A4A49_27530 No alias early light-induced protein 1, chloroplastic 0.05 Orthogroups_2024-Update
Brara.A02052.1 No alias LHC-related protein *(ELIP) 0.04 Orthogroups_2024-Update
Glyma.10G243800 No alias Chlorophyll A-B binding family protein 0.05 Orthogroups_2024-Update
Glyma.20G150600 No alias Chlorophyll A-B binding family protein 0.1 Orthogroups_2024-Update
HORVU0Hr1G008960.2 No alias LHC-related protein *(ELIP) 0.05 Orthogroups_2024-Update
HORVU0Hr1G013030.2 No alias LHC-related protein *(ELIP) 0.05 Orthogroups_2024-Update
HORVU0Hr1G023360.2 No alias LHC-related protein *(ELIP) 0.08 Orthogroups_2024-Update
HORVU0Hr1G031930.1 No alias LHC-related protein *(ELIP) 0.04 Orthogroups_2024-Update
HORVU0Hr1G038220.1 No alias LHC-related protein *(ELIP) 0.06 Orthogroups_2024-Update
HORVU1Hr1G067070.3 No alias LHC-related protein *(ELIP) 0.02 Orthogroups_2024-Update
HORVU1Hr1G067080.3 No alias LHC-related protein *(ELIP) 0.06 Orthogroups_2024-Update
HORVU1Hr1G087740.1 No alias LHC-related protein *(ELIP) 0.07 Orthogroups_2024-Update
HORVU4Hr1G063190.1 No alias LHC-related protein *(ELIP) 0.06 Orthogroups_2024-Update
HORVU4Hr1G066740.1 No alias LHC-related protein *(ELIP) 0.05 Orthogroups_2024-Update
HORVU4Hr1G066800.8 No alias LHC-related protein *(ELIP) 0.05 Orthogroups_2024-Update
HORVU4Hr1G066810.7 No alias LHC-related protein *(ELIP) 0.05 Orthogroups_2024-Update
HORVU5Hr1G000620.2 No alias LHC-related protein *(ELIP) 0.04 Orthogroups_2024-Update
HORVU5Hr1G063570.1 No alias LHC-related protein *(ELIP) 0.04 Orthogroups_2024-Update
HORVU5Hr1G063590.1 No alias LHC-related protein *(ELIP) 0.07 Orthogroups_2024-Update
HORVU5Hr1G063620.1 No alias LHC-related protein *(ELIP) 0.08 Orthogroups_2024-Update
HORVU5Hr1G063630.3 No alias LHC-related protein *(ELIP) 0.04 Orthogroups_2024-Update
HORVU5Hr1G063650.1 No alias LHC-related protein *(ELIP) 0.05 Orthogroups_2024-Update
HORVU5Hr1G063660.1 No alias LHC-related protein *(ELIP) 0.07 Orthogroups_2024-Update
HORVU5Hr1G063670.1 No alias LHC-related protein *(ELIP) 0.04 Orthogroups_2024-Update
Kfl00073_0090 kfl00073_0090_v1.1 (at4g14690 : 81.6) Encodes an early light-induced... 0.02 Orthogroups_2024-Update
Kfl00110_0040 kfl00110_0040_v1.1 (at3g22840 : 99.4) Encodes an early light-inducible... 0.01 Orthogroups_2024-Update
Kfl00161_0080 kfl00161_0080_v1.1 (p11432|eli_pea : 97.4) Early light-induced protein,... 0.03 Orthogroups_2024-Update
MA_10058549g0010 No alias (at3g22840 : 143.0) Encodes an early light-inducible... 0.02 Orthogroups_2024-Update
MA_10432802g0010 No alias (p11432|eli_pea : 172.0) Early light-induced protein,... 0.04 Orthogroups_2024-Update
Mp6g14520.1 No alias ELIP LHC-related protein 0.02 Orthogroups_2024-Update
PSME_00000632-RA No alias (at3g22840 : 133.0) Encodes an early light-inducible... 0.02 Orthogroups_2024-Update
PSME_00018672-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00024494-RA No alias (at3g22840 : 129.0) Encodes an early light-inducible... 0.02 Orthogroups_2024-Update
PSME_00035619-RA No alias (at4g14690 : 117.0) Encodes an early light-induced... 0.02 Orthogroups_2024-Update
PSME_00052641-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Potri.008G158000 No alias Chlorophyll A-B binding family protein 0.02 Orthogroups_2024-Update
Pp1s78_96V6 No alias elip1.8 gene for putative early light-induced protein ELIP1.8 0.03 Orthogroups_2024-Update
Seita.2G053300.1 No alias LHC-related protein *(ELIP) 0.05 Orthogroups_2024-Update
Seita.2G053700.1 No alias LHC-related protein *(ELIP) 0.05 Orthogroups_2024-Update
Seita.2G053800.1 No alias LHC-related protein *(ELIP) 0.04 Orthogroups_2024-Update
Sobic.002G052000.2 No alias LHC-related protein *(ELIP) 0.04 Orthogroups_2024-Update
Sobic.002G052100.1 No alias LHC-related protein *(ELIP) 0.04 Orthogroups_2024-Update
Solyc09g082690 No alias superoxide dismutase 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004097 catechol oxidase activity IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004564 beta-fructofuranosidase activity IEP Predicted GO
MF GO:0004575 sucrose alpha-glucosidase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
MF GO:0015926 glucosidase activity IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0090599 alpha-glucosidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 82 183
No external refs found!