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  5. Sopen06g025930

Sopen06g025930


Description : AMP-binding enzyme


Gene families : OG_42_0000133 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000133_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen06g025930
Cluster HCCA clusters: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
A4A49_31911 No alias 4-coumarate--coa ligase-like 6 0.04 Orthogroups_2024-Update
A4A49_40482 No alias 4-coumarate--coa ligase 1 0.03 Orthogroups_2024-Update
A4A49_41306 No alias 4-coumarate--coa ligase 2 0.04 Orthogroups_2024-Update
At1g65060 No alias 4-coumarate--CoA ligase 3... 0.03 Orthogroups_2024-Update
Bradi3g52350 No alias 4-coumarate:CoA ligase 3 0.02 Orthogroups_2024-Update
Bradi4g19947 No alias AMP-dependent synthetase and ligase family protein 0.02 Orthogroups_2024-Update
Brara.B03845.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.H02328.1 No alias OPC-8 0.03 Orthogroups_2024-Update
GRMZM2G328473 No alias AMP-dependent synthetase and ligase family protein 0.02 Orthogroups_2024-Update
Glyma.01G232400 No alias 4-coumarate:CoA ligase 3 0.05 Orthogroups_2024-Update
Glyma.11G010500 No alias 4-coumarate:CoA ligase 3 0.03 Orthogroups_2024-Update
Glyma.13G372000 No alias 4-coumarate:CoA ligase 2 0.04 Orthogroups_2024-Update
Glyma.15G001700 No alias 4-coumarate:CoA ligase 2 0.05 Orthogroups_2024-Update
Glyma.17G064600 No alias 4-coumarate:CoA ligase 2 0.03 Orthogroups_2024-Update
Glyma.19G075800 No alias AMP-dependent synthetase and ligase family protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G089000.2 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU7Hr1G111130.3 No alias p-coumarate 0.04 Orthogroups_2024-Update
LOC_Os01g67540 No alias AMP-binding domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g08100 No alias AMP-binding domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g05780 No alias 4-coumarate--CoA ligase-like 7, putative, expressed 0.02 Orthogroups_2024-Update
MA_8946476g0010 No alias (at1g62940 : 648.0) encodes an acyl-CoA synthetase, has... 0.03 Orthogroups_2024-Update
PSME_00022177-RA No alias (o24146|4cl2_tobac : 717.0) 4-coumarate--CoA ligase 2... 0.03 Orthogroups_2024-Update
PSME_00022472-RA No alias (at1g20510 : 519.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.01 Orthogroups_2024-Update
Potri.012G094800 No alias AMP-dependent synthetase and ligase family protein 0.02 Orthogroups_2024-Update
Potri.018G094200 No alias 4-coumarate:CoA ligase 2 0.03 Orthogroups_2024-Update
Potri.T071600 No alias 4-coumarate:CoA ligase 5 0.04 Orthogroups_2024-Update
Pp1s71_170V6 No alias 4-coumarate: ligase 0.02 Orthogroups_2024-Update
Seita.3G265000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.9G537200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G282800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc03g097030 No alias 4-coumarate--CoA ligase 0.06 Orthogroups_2024-Update
Solyc03g111170 No alias 4-coumarate:CoA ligase-like protein (AHRD V3.3 *** G7J515_MEDTR) 0.13 Orthogroups_2024-Update
Solyc03g117870 No alias 4-coumarate--CoA ligase 0.04 Orthogroups_2024-Update
Solyc06g068650 No alias 4-coumarate--CoA ligase 0.09 Orthogroups_2024-Update
Sopen03g030320 No alias AMP-binding enzyme 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 457 532
IPR000873 AMP-dep_Synth/Lig 38 448
No external refs found!