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  5. Bradi1g58882

Bradi1g58882


Description : Function unknown


Gene families : OG_42_0000127 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000127_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g58882
Cluster HCCA clusters: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
Bradi1g55357 No alias F-box and associated interaction domains-containing protein 0.02 Orthogroups_2024-Update
Bradi1g62561 No alias F-box and associated interaction domains-containing protein 0.03 Orthogroups_2024-Update
Bradi2g01195 No alias F-box and associated interaction domains-containing protein 0.04 Orthogroups_2024-Update
Bradi2g37270 No alias Function unknown 0.05 Orthogroups_2024-Update
Bradi3g00597 No alias F-box and associated interaction domains-containing protein 0.07 Orthogroups_2024-Update
Bradi3g01028 No alias F-box and associated interaction domains-containing protein 0.03 Orthogroups_2024-Update
Bradi3g38714 No alias F-box and associated interaction domains-containing protein 0.06 Orthogroups_2024-Update
GRMZM2G016613 No alias Function unknown 0.02 Orthogroups_2024-Update
HORVU2Hr1G062550.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G122100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G011390.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G011450.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G011580.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G082260.1 No alias Unknown function 0.05 Orthogroups_2024-Update
LOC_Os10g04850 No alias OsFBO5 - F-box and other domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g05530 No alias OsFBX372 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g10980 No alias OsFBX379 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
Seita.2G019300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.2G024100.1 No alias Unknown function 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 8 48
No external refs found!