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  5. Bradi1g62800

Bradi1g62800


Description : PETER PAN-like protein


Gene families : OG_42_0005553 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005553_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g62800
Cluster HCCA clusters: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
At5g61770 No alias PETER PAN-like protein [Source:UniProtKB/TrEMBL;Acc:F4K3M1] 0.05 Orthogroups_2024-Update
Brara.F02052.1 No alias pre-60S ribosomal subunit assembly factor *(SSF1) 0.14 Orthogroups_2024-Update
Cre10.g450879 No alias PETER PAN-like protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G046720.2 No alias pre-60S ribosomal subunit assembly factor *(SSF1) 0.03 Orthogroups_2024-Update
Mp6g06030.1 No alias pre-60S ribosomal subunit assembly factor (SSF1) 0.04 Orthogroups_2024-Update
Potri.002G204900 No alias PETER PAN-like protein 0.03 Orthogroups_2024-Update
Potri.014G129700 No alias PETER PAN-like protein 0.03 Orthogroups_2024-Update
Pp1s22_59V6 No alias MAC9.8; Peter Pan - like protein [Arabidopsis thaliana] 0.05 Orthogroups_2024-Update
Seita.9G408900.1 No alias pre-60S ribosomal subunit assembly factor *(SSF1) 0.16 Orthogroups_2024-Update
Sobic.001G376400.1 No alias pre-60S ribosomal subunit assembly factor *(SSF1) 0.08 Orthogroups_2024-Update
Solyc01g096800 No alias PETER PAN-like protein (AHRD V3.3 *** AT5G61770.3) 0.11 Orthogroups_2024-Update
Sopen01g040500 No alias Brix domain 0.03 Orthogroups_2024-Update
evm.model.contig_4461.11 No alias (at5g61770 : 211.0) PETER PAN-like protein (PPAN);... 0.03 Orthogroups_2024-Update
evm.model.tig00020912.43 No alias (at5g61770 : 80.1) PETER PAN-like protein (PPAN);... 0.03 Orthogroups_2024-Update
evm.model.tig00020912.49 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update
evm.model.tig00020912.51 No alias (at5g61770 : 257.0) PETER PAN-like protein (PPAN);... 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004176 ATP-dependent peptidase activity IEP Predicted GO
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
MF GO:0008649 rRNA methyltransferase activity IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016435 rRNA (guanine) methyltransferase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0030488 tRNA methylation IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
BP GO:0031167 rRNA methylation IEP Predicted GO
MF GO:0031369 translation initiation factor binding IEP Predicted GO
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
CC GO:0034708 methyltransferase complex IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
BP GO:0036265 RNA (guanine-N7)-methylation IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
CC GO:0043527 tRNA methyltransferase complex IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0070475 rRNA base methylation IEP Predicted GO
BP GO:0070476 rRNA (guanine-N7)-methylation IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007109 Brix 66 309
No external refs found!