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  5. Sopen06g027050

Sopen06g027050


Description : Dof domain, zinc finger


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen06g027050
Cluster HCCA clusters: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
29563 No alias OBF binding protein 4 0.02 Orthogroups_2024-Update
29617 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
A4A49_24184 No alias dof zinc finger protein dof3.1 0.03 Orthogroups_2024-Update
A4A49_34579 No alias dof zinc finger protein pbf 0.02 Orthogroups_2024-Update
At1g51700 No alias Dof zinc finger protein DOF1.7... 0.03 Orthogroups_2024-Update
At3g47500 No alias Cyclic dof factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFV3] 0.05 Orthogroups_2024-Update
Bradi1g17410 No alias cycling DOF factor 3 0.02 Orthogroups_2024-Update
Bradi1g73710 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
Bradi3g56380 No alias OBF binding protein 4 0.03 Orthogroups_2024-Update
Brara.C04204.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.F01753.1 No alias transcription factor *(DOF) 0.06 Orthogroups_2024-Update
Brara.F02115.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Brara.G01458.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Brara.K00739.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
GRMZM2G134545 No alias TARGET OF MONOPTEROS 6 0.04 Orthogroups_2024-Update
GRMZM2G162749 No alias cycling DOF factor 1 0.04 Orthogroups_2024-Update
Glyma.02G108600 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
Glyma.04G168300 No alias cycling DOF factor 3 0.03 Orthogroups_2024-Update
Glyma.05G025900 No alias cycling DOF factor 3 0.04 Orthogroups_2024-Update
Glyma.06G194800 No alias cycling DOF factor 3 0.04 Orthogroups_2024-Update
Glyma.07G229600 No alias cycling DOF factor 2 0.05 Orthogroups_2024-Update
Glyma.11G151497 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
Glyma.15G022800 No alias DOF zinc finger protein 1 0.01 Orthogroups_2024-Update
Glyma.17G101000 No alias cycling DOF factor 3 0.03 Orthogroups_2024-Update
HORVU4Hr1G074990.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
LOC_Os03g07360 No alias expressed protein 0.04 Orthogroups_2024-Update
LOC_Os07g48570 No alias expressed protein 0.04 Orthogroups_2024-Update
Pp1s170_42V6 No alias f-box family protein 0.02 Orthogroups_2024-Update
Seita.2G436800.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Seita.5G052700.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Seita.9G525000.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Sobic.002G421900.1 No alias transcription factor *(DOF) 0.06 Orthogroups_2024-Update
Sobic.009G014400.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Solyc02g078620 No alias Dof zinc finger protein (AHRD V3.3 *** W9RD26_9ROSA) 0.03 Orthogroups_2024-Update
Solyc03g115940 No alias Dof zinc finger protein (AHRD V3.3 *** C4B6D7_IPOBA) 0.15 Orthogroups_2024-Update
Solyc06g069760 No alias Dof zinc finger protein 22 0.15 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003851 Znf_Dof 142 198
No external refs found!