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  5. Bradi1g73030

Bradi1g73030


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG_42_0000344 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000344_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g73030
Cluster HCCA clusters: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
100454 No alias RNA-binding protein 47C\' 0.02 Orthogroups_2024-Update
At1g47500 No alias Polyadenylate-binding protein RBP47C'... 0.03 Orthogroups_2024-Update
At5g54900 No alias Polyadenylate-binding protein RBP45A... 0.02 Orthogroups_2024-Update
Bradi4g32380 No alias RNA-binding protein 47C 0.04 Orthogroups_2024-Update
Glyma.06G037600 No alias RNA-binding protein 47C 0.04 Orthogroups_2024-Update
Glyma.12G057300 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G069180.3 No alias regulatory factor *(RBP45/47) of mRNA stress granule formation 0.04 Orthogroups_2024-Update
LOC_Os03g37270 No alias RNA recognition motif containing protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_10433660g0010 No alias (at5g19350 : 259.0) RNA-binding (RRM/RBD/RNP motifs)... 0.03 Orthogroups_2024-Update
MA_108444g0010 No alias (at5g54900 : 167.0) RNA-binding protein 45A (RBP45A);... 0.02 Orthogroups_2024-Update
PSME_00009027-RA No alias (at4g27000 : 211.0) ATRBP45C; CONTAINS InterPro... 0.04 Orthogroups_2024-Update
Potri.009G054400 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Orthogroups_2024-Update
Seita.2G234200.1 No alias regulatory factor *(RBP45/47) of mRNA stress granule formation 0.03 Orthogroups_2024-Update
Solyc01g108500 No alias RNA-binding protein (AHRD V3.3 *** A0A0K9NR72_ZOSMR) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003919 FMN adenylyltransferase activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0005986 sucrose biosynthetic process IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0019203 carbohydrate phosphatase activity IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0046422 violaxanthin de-epoxidase activity IEP Predicted GO
MF GO:0050307 sucrose-phosphate phosphatase activity IEP Predicted GO
MF GO:0050308 sugar-phosphatase activity IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 112 177
IPR000504 RRM_dom 19 87
IPR000504 RRM_dom 230 293
No external refs found!