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  5. Sopen06g028160

Sopen06g028160


Description : Ribosomal protein L22p/L17e


Gene families : OG_42_0001801 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001801_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen06g028160
Cluster HCCA clusters: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
96251 No alias Ribosomal protein L22p/L17e family protein 0.21 Orthogroups_2024-Update
At1g27400 No alias 60S ribosomal protein L17-1... 0.06 Orthogroups_2024-Update
Bradi3g41150 No alias Ribosomal protein L22p/L17e family protein 0.33 Orthogroups_2024-Update
Bradi4g08667 No alias Ribosomal protein L22p/L17e family protein 0.24 Orthogroups_2024-Update
Brara.B01721.1 No alias component *(uL22) of large ribosomal-subunit (LSU) proteome 0.41 Orthogroups_2024-Update
Brara.G00848.1 No alias component *(uL22) of large ribosomal-subunit (LSU) proteome 0.13 Orthogroups_2024-Update
Brara.G02572.1 No alias component *(uL22) of large ribosomal-subunit (LSU) proteome 0.46 Orthogroups_2024-Update
Brara.H02055.1 No alias component *(uL22) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Brara.I03016.1 No alias component *(uL22) of large ribosomal-subunit (LSU) proteome 0.08 Orthogroups_2024-Update
Cre13.g568900 No alias Ribosomal protein L22p/L17e family protein 0.35 Orthogroups_2024-Update
GRMZM2G126594 No alias Ribosomal protein L22p/L17e family protein 0.08 Orthogroups_2024-Update
GRMZM2G148744 No alias Ribosomal protein L22p/L17e family protein 0.2 Orthogroups_2024-Update
Glyma.05G146800 No alias Ribosomal protein L22p/L17e family protein 0.21 Orthogroups_2024-Update
Glyma.08G103700 No alias Ribosomal protein L22p/L17e family protein 0.15 Orthogroups_2024-Update
Glyma.11G249700 No alias Ribosomal protein L22p/L17e family protein 0.23 Orthogroups_2024-Update
Glyma.18G007500 No alias Ribosomal protein L22p/L17e family protein 0.12 Orthogroups_2024-Update
HORVU5Hr1G052280.1 No alias component *(uL22) of large ribosomal-subunit (LSU) proteome 0.25 Orthogroups_2024-Update
HORVU7Hr1G054010.1 No alias component *(uL22) of large ribosomal-subunit (LSU) proteome 0.15 Orthogroups_2024-Update
Kfl00006_0040 kfl00006_0040_v1.1 (at1g67430 : 219.0) Ribosomal protein L22p/L17e family... 0.16 Orthogroups_2024-Update
LOC_Os08g41810 No alias ribosomal protein L22, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g08430 No alias ribosomal protein L22, putative, expressed 0.04 Orthogroups_2024-Update
MA_10430182g0010 No alias (at1g27400 : 272.0) Ribosomal protein L22p/L17e family... 0.14 Orthogroups_2024-Update
MA_64923g0010 No alias (o48557|rl17_maize : 306.0) 60S ribosomal protein L17 -... 0.06 Orthogroups_2024-Update
Mp1g10230.1 No alias component RPL17 of LSU proteome component 0.1 Orthogroups_2024-Update
PSME_00016621-RA No alias (o48557|rl17_maize : 300.0) 60S ribosomal protein L17 -... 0.11 Orthogroups_2024-Update
Potri.008G175500 No alias Ribosomal protein L22p/L17e family protein 0.04 Orthogroups_2024-Update
Potri.010G060400 No alias Ribosomal protein L22p/L17e family protein 0.03 Orthogroups_2024-Update
Potri.012G096600 No alias Ribosomal protein L22p/L17e family protein 0.15 Orthogroups_2024-Update
Pp1s22_76V6 No alias 60s ribosomal protein 0.11 Orthogroups_2024-Update
Pp1s364_56V6 No alias 60s ribosomal protein 0.4 Orthogroups_2024-Update
Pp1s38_376V6 No alias 60s ribosomal protein 0.2 Orthogroups_2024-Update
Pp1s97_74V6 No alias 60s ribosomal protein 0.26 Orthogroups_2024-Update
Pp1s97_78V6 No alias 60s ribosomal protein 0.31 Orthogroups_2024-Update
Seita.5G119300.1 No alias component *(uL22) of large ribosomal-subunit (LSU) proteome 0.19 Orthogroups_2024-Update
Seita.6G112100.1 No alias component *(uL22) of large ribosomal-subunit (LSU) proteome 0.08 Orthogroups_2024-Update
Seita.6G222100.1 No alias component *(uL22) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Seita.7G314300.1 No alias component *(uL22) of large ribosomal-subunit (LSU) proteome 0.32 Orthogroups_2024-Update
Seita.8G022000.1 No alias component *(uL22) of large ribosomal-subunit (LSU) proteome 0.14 Orthogroups_2024-Update
Sobic.001G016400.1 No alias component *(uL22) of large ribosomal-subunit (LSU) proteome 0.37 Orthogroups_2024-Update
Sobic.001G016500.1 No alias component *(uL22) of large ribosomal-subunit (LSU) proteome 0.19 Orthogroups_2024-Update
Sobic.009G076400.1 No alias component *(uL22) of large ribosomal-subunit (LSU) proteome 0.38 Orthogroups_2024-Update
Solyc03g111230 No alias Ribosomal protein (AHRD V3.3 *** Q947H2_PETHY) 0.38 Orthogroups_2024-Update
Solyc06g071870 No alias Ribosomal protein (AHRD V3.3 *** Q947H2_PETHY) 0.37 Orthogroups_2024-Update
Solyc06g071880 No alias 60S ribosomal protein L17 (AHRD V3.3 *** A0A0D3QSL6_TOBAC) 0.38 Orthogroups_2024-Update
evm.model.contig_2031.15 No alias (p35267|rl172_horvu : 178.0) 60S ribosomal protein L17-2... 0.45 Orthogroups_2024-Update
evm.model.tig00001215.8 No alias (o48557|rl17_maize : 230.0) 60S ribosomal protein L17 -... 0.27 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001063 Ribosomal_L22 17 152
No external refs found!