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  5. Bradi2g00740

Bradi2g00740


Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein


Gene families : OG_42_0000435 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000435_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g00740
Cluster HCCA clusters: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
Brara.H01580.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
Brara.I05110.1 No alias bHLH-type transcription factor 0.04 Orthogroups_2024-Update
PSME_00012621-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00019999-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00029446-RA No alias (at1g12540 : 86.7) basic helix-loop-helix (bHLH)... 0.02 Orthogroups_2024-Update
Potri.013G129800 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Seita.5G073000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc10g008260 No alias bHLH transcription factor 093 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 23 90
No external refs found!