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  5. Bradi2g03840

Bradi2g03840


Description : Thiamine pyrophosphate dependent pyruvate decarboxylase family protein


Gene families : OG_42_0000963 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000963_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g03840
Cluster HCCA clusters: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
Glyma.07G153100 No alias Thiamine pyrophosphate dependent pyruvate decarboxylase... 0.04 Orthogroups_2024-Update
Glyma.08G176600 No alias Thiamine pyrophosphate dependent pyruvate decarboxylase... 0.03 Orthogroups_2024-Update
LOC_Os07g49250 No alias thiamine pyrophosphate enzyme, C-terminal TPP binding... 0.02 Orthogroups_2024-Update
MA_470233g0010 No alias (at4g33070 : 398.0) Thiamine pyrophosphate dependent... 0.02 Orthogroups_2024-Update
Seita.3G209500.1 No alias pyruvate decarboxylase *(PDC) & EC_4.1 carbon-carbon lyase 0.04 Orthogroups_2024-Update
evm.model.tig00020614.45 No alias (p51848|pdc2_orysa : 471.0) Pyruvate decarboxylase... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA InterProScan predictions
MF GO:0003824 catalytic activity IEA InterProScan predictions
MF GO:0030976 thiamine pyrophosphate binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0004003 ATP-dependent DNA helicase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
MF GO:0008026 ATP-dependent helicase activity IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
BP GO:0015858 nucleoside transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
MF GO:0070035 purine NTP-dependent helicase activity IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
BP GO:1901642 nucleoside transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR012001 Thiamin_PyroP_enz_TPP-bd_dom 27 204
IPR011766 TPP_enzyme-bd_C 444 568
IPR012000 Thiamin_PyroP_enz_cen_dom 233 350
No external refs found!