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  5. Bradi2g05070

Bradi2g05070


Description : Serinc-domain containing serine and sphingolipid biosynthesis protein


Gene families : OG_42_0001935 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001935_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g05070
Cluster HCCA clusters: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
83891 No alias Serinc-domain containing serine and sphingolipid... 0.02 Orthogroups_2024-Update
Brara.C03954.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.G00625.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.H00517.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G018756 No alias Serinc-domain containing serine and sphingolipid... 0.03 Orthogroups_2024-Update
PSME_00024569-RA No alias (at4g13345 : 482.0) maternal effect embryo arrest 55... 0.02 Orthogroups_2024-Update
Seita.5G127600.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004096 catalase activity IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006814 sodium ion transport IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0016851 magnesium chelatase activity IEP Predicted GO
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Predicted GO
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Predicted GO
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR005016 TDE1/TMS 338 416
IPR005016 TDE1/TMS 38 328
No external refs found!