Sopen06g029660

Description : Ribosomal L27e protein family

Gene families : OG_42_0001324 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001324_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen06g029660
Cluster	HCCA clusters: Cluster_84

Target	Alias	Description	ECC score	Gene Family Method
166700	No alias	Ribosomal L27e protein family	0.25	Orthogroups_2024-Update
A4A49_05318	No alias	60s ribosomal protein l27	0.24	Orthogroups_2024-Update
A4A49_21973	No alias	60s ribosomal protein l27	0.08	Orthogroups_2024-Update
At2g32220	No alias	60S ribosomal protein L27-1...	0.04	Orthogroups_2024-Update
At3g22230	No alias	60S ribosomal protein L27-2...	0.06	Orthogroups_2024-Update
At4g15000	No alias	60S ribosomal protein L27 [Source:UniProtKB/TrEMBL;Acc:Q0WRB8]	0.12	Orthogroups_2024-Update
Bradi1g30210	No alias	Ribosomal L27e protein family	0.04	Orthogroups_2024-Update
Brara.A02020.1	No alias	component *(eL27) of large ribosomal-subunit (LSU) proteome	0.09	Orthogroups_2024-Update
Brara.A02735.1	No alias	component *(eL27) of large ribosomal-subunit (LSU) proteome	0.12	Orthogroups_2024-Update
Brara.C03864.1	No alias	component *(eL27) of large ribosomal-subunit (LSU) proteome	0.35	Orthogroups_2024-Update
Brara.E01420.1	No alias	component *(eL27) of large ribosomal-subunit (LSU) proteome	0.39	Orthogroups_2024-Update
Brara.E02021.1	No alias	component *(eL27) of large ribosomal-subunit (LSU) proteome	0.06	Orthogroups_2024-Update
Brara.H00790.1	No alias	component *(eL27) of large ribosomal-subunit (LSU) proteome	0.19	Orthogroups_2024-Update
Cre17.g701650	No alias	Ribosomal L27e protein family	0.32	Orthogroups_2024-Update
GRMZM2G016250	No alias	Ribosomal L27e protein family	0.26	Orthogroups_2024-Update
GRMZM2G326066	No alias	Ribosomal L27e protein family	0.13	Orthogroups_2024-Update
Glyma.05G132800	No alias	Ribosomal L27e protein family	0.02	Orthogroups_2024-Update
Glyma.09G052100	No alias	Ribosomal L27e protein family	0.06	Orthogroups_2024-Update
Glyma.15G158400	No alias	Ribosomal L27e protein family	0.19	Orthogroups_2024-Update
HORVU7Hr1G063280.1	No alias	component *(eL27) of large ribosomal-subunit (LSU) proteome	0.18	Orthogroups_2024-Update
Kfl00071_0270	kfl00071_0270_v1.1	(q05462\|rl27_pea : 209.0) 60S ribosomal protein L27 -...	0.13	Orthogroups_2024-Update
LOC_Os02g18380	No alias	60S ribosomal protein L27-3, putative, expressed	0.05	Orthogroups_2024-Update
PSME_00015628-RA	No alias	(at3g22230 : 220.0) Ribosomal L27e protein family;...	0.18	Orthogroups_2024-Update
Potri.001G342500	No alias	Ribosomal L27e protein family	0.07	Orthogroups_2024-Update
Potri.016G019000	No alias	Ribosomal L27e protein family	0.03	Orthogroups_2024-Update
Pp1s101_74V6	No alias	ribosomal protein	0.2	Orthogroups_2024-Update
Pp1s221_49V6	No alias	ribosomal protein	0.34	Orthogroups_2024-Update
Pp1s83_116V6	No alias	60S ribosomal protein L27 [Pisum sativum]	0.25	Orthogroups_2024-Update
Seita.4G160400.1	No alias	component *(eL27) of large ribosomal-subunit (LSU) proteome	0.23	Orthogroups_2024-Update
Sobic.006G221200.1	No alias	component *(eL27) of large ribosomal-subunit (LSU) proteome	0.29	Orthogroups_2024-Update
Sobic.010G230700.1	No alias	component *(eL27) of large ribosomal-subunit (LSU) proteome	0.37	Orthogroups_2024-Update
Solyc06g073300	No alias	60S ribosomal protein L27 (AHRD V3.3 *** A0A0V0HNB9_SOLCH)	0.43	Orthogroups_2024-Update
Solyc07g043360	No alias	60S ribosomal protein L27 (AHRD V3.3 *** K4CEJ5_SOLLC)	0.07	Orthogroups_2024-Update
evm.model.contig_2045.6	No alias	(p41101\|rl27_soltu : 144.0) 60S ribosomal protein L27 -...	0.51	Orthogroups_2024-Update
evm.model.tig00021275.23	No alias	(at3g22230 : 163.0) Ribosomal L27e protein family;...	0.25	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	InterProScan predictions
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular	IEA	InterProScan predictions
CC	GO:0005840	ribosome	IEA	InterProScan predictions
BP	GO:0006412	translation	IEA	InterProScan predictions
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001141	Ribosomal_L27e	52	135

External Links

No external refs found!

Sopen06g029660

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation