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  5. Bradi2g11140

Bradi2g11140


Description : Chitinase family protein


Gene families : OG_42_0000472 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000472_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g11140
Cluster HCCA clusters: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Bradi2g47210 No alias basic chitinase 0.04 Orthogroups_2024-Update
Bradi3g32340 No alias basic chitinase 0.02 Orthogroups_2024-Update
GRMZM2G064360 No alias Chitinase family protein 0.02 Orthogroups_2024-Update
Glyma.16G119200 No alias basic chitinase 0.03 Orthogroups_2024-Update
LOC_Os10g39680 No alias CHIT14 - Chitinase family protein precursor, expressed 0.02 Orthogroups_2024-Update
Mp5g02510.1 No alias no description available(sp|q949h3|chi1_hevbr : 195.0) 0.02 Orthogroups_2024-Update
Mp5g21830.1 No alias Endochitinase CH25 OS=Brassica napus... 0.04 Orthogroups_2024-Update
Potri.014G111800 No alias Chitinase family protein 0.02 Orthogroups_2024-Update
Potri.T175200 No alias basic chitinase 0.03 Orthogroups_2024-Update
Solyc02g082920 No alias acidic extracellular 26 kD chitinase 0.03 Orthogroups_2024-Update
Solyc02g082960 No alias Chitinase (AHRD V3.3 *** Q9FS45_VITVI) 0.03 Orthogroups_2024-Update
Solyc10g055820 No alias Chitinase (AHRD V3.3 *** B9VRK7_CAPAN) 0.03 Orthogroups_2024-Update
Sopen02g027750 No alias Chitinase class I 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA InterProScan predictions
BP GO:0006032 chitin catabolic process IEA InterProScan predictions
BP GO:0016998 cell wall macromolecule catabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 54 286
No external refs found!