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  5. Sopen06g030750

Sopen06g030750


Description : Ribosomal protein L1p/L10e family


Gene families : OG_42_0001635 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001635_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen06g030750
Cluster HCCA clusters: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
230302 No alias Ribosomal protein L1p/L10e family 0.15 Orthogroups_2024-Update
A4A49_21782 No alias 60s ribosomal protein l10a-1 0.11 Orthogroups_2024-Update
At2g27530 No alias 60S ribosomal protein L10a-2... 0.02 Orthogroups_2024-Update
At5g22440 No alias 60S ribosomal protein L10a-3... 0.08 Orthogroups_2024-Update
Bradi2g55600 No alias Ribosomal protein L1p/L10e family 0.09 Orthogroups_2024-Update
Bradi3g42800 No alias Ribosomal protein L1p/L10e family 0.15 Orthogroups_2024-Update
Brara.B00972.1 No alias component *(uL1) of large ribosomal-subunit (LSU) proteome 0.09 Orthogroups_2024-Update
Brara.C01003.1 No alias component *(uL1) of large ribosomal-subunit (LSU) proteome 0.26 Orthogroups_2024-Update
Brara.D01641.1 No alias component *(uL1) of large ribosomal-subunit (LSU) proteome 0.23 Orthogroups_2024-Update
Brara.G01318.1 No alias component *(uL1) of large ribosomal-subunit (LSU) proteome 0.1 Orthogroups_2024-Update
Brara.J01470.1 No alias component *(uL1) of large ribosomal-subunit (LSU) proteome 0.16 Orthogroups_2024-Update
Cre02.g101350 No alias Ribosomal protein L1p/L10e family 0.12 Orthogroups_2024-Update
Glyma.11G231000 No alias Ribosomal protein L1p/L10e family 0.09 Orthogroups_2024-Update
Glyma.12G184900 No alias Ribosomal protein L1p/L10e family 0.15 Orthogroups_2024-Update
Glyma.13G316400 No alias Ribosomal protein L1p/L10e family 0.19 Orthogroups_2024-Update
Glyma.18G026100 No alias Ribosomal protein L1p/L10e family 0.23 Orthogroups_2024-Update
Glyma.19G194922 No alias Ribosomal protein L1p/L10e family 0.1 Orthogroups_2024-Update
HORVU3Hr1G084310.1 No alias component *(uL1) of large ribosomal-subunit (LSU) proteome 0.09 Orthogroups_2024-Update
HORVU4Hr1G001350.5 No alias component *(uL1) of large ribosomal-subunit (LSU) proteome 0.11 Orthogroups_2024-Update
HORVU7Hr1G059090.5 No alias component *(uL1) of large ribosomal-subunit (LSU) proteome 0.15 Orthogroups_2024-Update
Kfl00440_0070 kfl00440_0070_v1.... (at2g27530 : 310.0) Encodes ribosomal protein L10aP.... 0.15 Orthogroups_2024-Update
LOC_Os01g64090 No alias L1P family of ribosomal proteins domain containing... 0.02 Orthogroups_2024-Update
LOC_Os02g21660 No alias L1P family of ribosomal proteins domain containing... 0.04 Orthogroups_2024-Update
MA_12000g0010 No alias (at5g22440 : 343.0) Ribosomal protein L1p/L10e family;... 0.07 Orthogroups_2024-Update
MA_71921g0010 No alias (at1g08360 : 345.0) Ribosomal protein L1p/L10e family;... 0.1 Orthogroups_2024-Update
Mp3g07650.1 No alias component RPL10a of LSU proteome component 0.13 Orthogroups_2024-Update
Mp3g07870.1 No alias component RPL10a of LSU proteome component 0.03 Orthogroups_2024-Update
PSME_00037360-RA No alias (at1g08360 : 341.0) Ribosomal protein L1p/L10e family;... 0.11 Orthogroups_2024-Update
Potri.004G202766 No alias Ribosomal protein L1p/L10e family 0.07 Orthogroups_2024-Update
Potri.004G202832 No alias Ribosomal protein L1p/L10e family 0.07 Orthogroups_2024-Update
Potri.007G034800 No alias Ribosomal protein L1p/L10e family 0.13 Orthogroups_2024-Update
Potri.007G035600 No alias Ribosomal protein L1p/L10e family 0.04 Orthogroups_2024-Update
Pp1s18_121V6 No alias 60s ribosomal protein l10a-1 0.09 Orthogroups_2024-Update
Pp1s40_297V6 No alias 60s ribosomal protein l10a-1 0.13 Orthogroups_2024-Update
Seita.5G389700.1 No alias component *(uL1) of large ribosomal-subunit (LSU) proteome 0.16 Orthogroups_2024-Update
Seita.6G243700.1 No alias component *(uL1) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Sobic.003G363800.2 No alias component *(uL1) of large ribosomal-subunit (LSU) proteome 0.23 Orthogroups_2024-Update
Solyc01g009520 No alias Ribosomal protein (AHRD V3.3 *** K4ATE8_SOLLC) 0.18 Orthogroups_2024-Update
Solyc06g074300 No alias 5'-3' exonuclease family protein (AHRD V3.3 --* AT3G28030.4) 0.27 Orthogroups_2024-Update
Solyc11g068420 No alias Ribosomal protein (AHRD V3.3 *** M1CHW0_SOLTU) 0.16 Orthogroups_2024-Update
evm.model.contig_2315.2 No alias (at2g27530 : 237.0) Encodes ribosomal protein L10aP.... 0.32 Orthogroups_2024-Update
evm.model.tig00020697.31 No alias (at5g22440 : 146.0) Ribosomal protein L1p/L10e family;... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR028364 Ribosomal_L1/biogenesis 22 210
No external refs found!