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  5. Bradi2g16402

Bradi2g16402


Description : Function unknown


Gene families : OG_42_0009035 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009035_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g16402
Cluster HCCA clusters: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
Glyma.05G129100 No alias Function unknown 0.06 Orthogroups_2024-Update
Glyma.08G083700 No alias Function unknown 0.03 Orthogroups_2024-Update
HORVU1Hr1G088270.4 No alias Unknown function 0.03 Orthogroups_2024-Update
Kfl00130_0230 kfl00130_0230_v1.1 no hits & (original description: no original description) 0.01 Orthogroups_2024-Update
LOC_Os05g49060 No alias uncharacterized protein ycf23, putative, expressed 0.03 Orthogroups_2024-Update
Seita.3G144600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.009G233800.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Solyc02g070800 No alias Thiamine monophosphate synthase (AHRD V3.3 *** I3SV46_MEDTR) 0.04 Orthogroups_2024-Update
Sopen02g019890 No alias Protein of unknown function (DUF561) 0.05 Orthogroups_2024-Update
Sopen02g019900 No alias Protein of unknown function (DUF561) 0.05 Orthogroups_2024-Update
Sopen02g019910 No alias Protein of unknown function (DUF561) 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004784 superoxide dismutase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006536 glutamate metabolic process IEP Predicted GO
BP GO:0006537 glutamate biosynthetic process IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006772 thiamine metabolic process IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009228 thiamine biosynthetic process IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0015930 glutamate synthase activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042723 thiamine-containing compound metabolic process IEP Predicted GO
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007570 Uncharacterised_Ycf23 49 282
No external refs found!