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  5. Sopen06g030910

Sopen06g030910


Description : 60s Acidic ribosomal protein


Gene families : OG_42_0001058 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001058_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen06g030910
Cluster HCCA clusters: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
139397 No alias 60S acidic ribosomal protein family 0.13 Orthogroups_2024-Update
At2g27710 No alias AT2G27710 protein [Source:UniProtKB/TrEMBL;Acc:B9DGN3] 0.15 Orthogroups_2024-Update
At2g27720 No alias 60S acidic ribosomal protein family... 0.03 Orthogroups_2024-Update
At3g44590 No alias Acidic ribosomal protein P2-like... 0.1 Orthogroups_2024-Update
Bradi2g23830 No alias 60S acidic ribosomal protein family 0.06 Orthogroups_2024-Update
Bradi5g09212 No alias 60S acidic ribosomal protein family 0.22 Orthogroups_2024-Update
Bradi5g09217 No alias 60S acidic ribosomal protein family 0.28 Orthogroups_2024-Update
Brara.C02416.1 No alias component *(RPP2) of large ribosomal-subunit (LSU) proteome 0.12 Orthogroups_2024-Update
Brara.D01652.1 No alias component *(RPP2) of large ribosomal-subunit (LSU) proteome 0.49 Orthogroups_2024-Update
Brara.G01325.1 No alias component *(RPP2) of large ribosomal-subunit (LSU) proteome 0.36 Orthogroups_2024-Update
Cre02.g143050 No alias 60S acidic ribosomal protein family 0.33 Orthogroups_2024-Update
GRMZM2G075630 No alias 60S acidic ribosomal protein family 0.16 Orthogroups_2024-Update
GRMZM2G102891 No alias 60S acidic ribosomal protein family 0.17 Orthogroups_2024-Update
GRMZM2G105712 No alias 60S acidic ribosomal protein family 0.02 Orthogroups_2024-Update
GRMZM2G119809 No alias 60S acidic ribosomal protein family 0.18 Orthogroups_2024-Update
Glyma.03G193100 No alias 60S acidic ribosomal protein family 0.12 Orthogroups_2024-Update
Glyma.10G067800 No alias 60S acidic ribosomal protein family 0.15 Orthogroups_2024-Update
Glyma.12G182800 No alias 60S acidic ribosomal protein family 0.19 Orthogroups_2024-Update
Glyma.13G318200 No alias 60S acidic ribosomal protein family 0.19 Orthogroups_2024-Update
Glyma.19G193200 No alias 60S acidic ribosomal protein family 0.13 Orthogroups_2024-Update
Glyma.U031221 No alias 60S acidic ribosomal protein family 0.19 Orthogroups_2024-Update
HORVU1Hr1G073640.1 No alias component *(RPP2) of large ribosomal-subunit (LSU) proteome 0.17 Orthogroups_2024-Update
LOC_Os01g09510 No alias 60S acidic ribosomal protein, putative, expressed 0.05 Orthogroups_2024-Update
LOC_Os05g37330 No alias 60S acidic ribosomal protein, putative, expressed 0.07 Orthogroups_2024-Update
MA_10431146g0010 No alias (o24415|rla2b_maize : 90.5) 60S acidic ribosomal protein... 0.04 Orthogroups_2024-Update
Mp1g06260.1 No alias component RPP2 of LSU proteome component 0.14 Orthogroups_2024-Update
Mp1g08160.1 No alias component RPP2 of LSU proteome component 0.1 Orthogroups_2024-Update
PSME_00022751-RA No alias (o24415|rla2b_maize : 100.0) 60S acidic ribosomal... 0.2 Orthogroups_2024-Update
PSME_00050387-RA No alias (original description: no original description) 0.2 Orthogroups_2024-Update
Potri.004G185800 No alias 60S acidic ribosomal protein family 0.11 Orthogroups_2024-Update
Potri.009G146200 No alias 60S acidic ribosomal protein family 0.09 Orthogroups_2024-Update
Pp1s14_289V6 No alias 60s acidic ribosomal protein 0.27 Orthogroups_2024-Update
Pp1s21_165V6 No alias 60s acidic ribosomal protein 0.34 Orthogroups_2024-Update
Pp1s30_261V6 No alias 60s acidic ribosomal protein 0.22 Orthogroups_2024-Update
Pp1s409_34V6 No alias 60s acidic ribosomal protein 0.02 Orthogroups_2024-Update
Pp1s51_319V6 No alias 60s acidic ribosomal protein 0.31 Orthogroups_2024-Update
Seita.6G192700.1 No alias component *(RPP2) of large ribosomal-subunit (LSU) proteome 0.19 Orthogroups_2024-Update
Seita.7G089200.1 No alias component *(RPP2) of large ribosomal-subunit (LSU) proteome 0.11 Orthogroups_2024-Update
Sobic.006G067800.1 No alias component *(RPP2) of large ribosomal-subunit (LSU) proteome 0.33 Orthogroups_2024-Update
Sobic.006G260400.1 No alias component *(RPP2) of large ribosomal-subunit (LSU) proteome 0.34 Orthogroups_2024-Update
Sobic.009G242300.3 No alias component *(RPP2) of large ribosomal-subunit (LSU) proteome 0.22 Orthogroups_2024-Update
Solyc06g074430 No alias 60s acidic ribosomal protein-like protein (AHRD V3.3 ***... 0.33 Orthogroups_2024-Update
Solyc11g067100 No alias 60s acidic ribosomal family protein (AHRD V3.3 *** A9PCM7_POPTR) 0.43 Orthogroups_2024-Update
evm.model.contig_2346.3 No alias no hits & (original description: no original description) 0.38 Orthogroups_2024-Update
evm.model.contig_3407.5 No alias no hits & (original description: no original description) 0.52 Orthogroups_2024-Update
evm.model.tig00020830.75 No alias no hits & (original description: no original description) 0.16 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!