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  5. Bradi2g20210

Bradi2g20210


Description : Topoisomerase II-associated protein PAT1


Gene families : OG_42_0001618 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001618_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g20210
Cluster HCCA clusters: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
A4A49_02016 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Brara.F01158.1 No alias mRNA decay factor *(PAT1) 0.04 Orthogroups_2024-Update
Cre06.g278203 No alias Function unknown 0.02 Orthogroups_2024-Update
GRMZM2G011079 No alias Function unknown 0.03 Orthogroups_2024-Update
GRMZM2G101760 No alias Topoisomerase II-associated protein PAT1 0.04 Orthogroups_2024-Update
Glyma.08G171800 No alias Function unknown 0.04 Orthogroups_2024-Update
Glyma.15G214500 No alias Function unknown 0.02 Orthogroups_2024-Update
HORVU1Hr1G077510.5 No alias mRNA decay factor *(PAT1) 0.02 Orthogroups_2024-Update
Kfl00377_0140 kfl00377_0140_v1.1 (at1g79090 : 251.0) FUNCTIONS IN: molecular_function... 0.02 Orthogroups_2024-Update
LOC_Os02g31220 No alias expressed protein 0.03 Orthogroups_2024-Update
Potri.006G021900 No alias Topoisomerase II-associated protein PAT1 0.03 Orthogroups_2024-Update
Sobic.003G309200.1 No alias mRNA decay factor *(PAT1) 0.02 Orthogroups_2024-Update
evm.model.tig00021357.9 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
MF GO:0005534 galactose binding IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0007030 Golgi organization IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008565 protein transporter activity IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0032977 membrane insertase activity IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
MF GO:0048029 monosaccharide binding IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!