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  5. Bradi2g27260

Bradi2g27260


Description : RNA-binding protein-defense related 1


Gene families : OG_42_0001337 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001337_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g27260
Cluster HCCA clusters: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
Bradi2g60300 No alias RNA-binding protein-defense related 1 0.04 Orthogroups_2024-Update
Glyma.03G208500 No alias RNA-binding protein-defense related 1 0.04 Orthogroups_2024-Update
Glyma.07G237900 No alias RNA binding;abscisic acid binding 0.03 Orthogroups_2024-Update
Glyma.17G035500 No alias RNA binding;abscisic acid binding 0.02 Orthogroups_2024-Update
MA_10429234g0010 No alias (at4g03110 : 474.0) Encodes a putative RNA-binding... 0.02 Orthogroups_2024-Update
Sobic.003G420100.1 No alias Unknown function 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 41 105
IPR000504 RRM_dom 375 445
IPR000504 RRM_dom 129 197
No external refs found!