1. Home
  2. Species
  3. Brachypodium distachyon
  4. Sequence
  5. Bradi2g28900

Bradi2g28900


Description : Function unknown


Gene families : OG_42_0001470 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001470_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g28900
Cluster HCCA clusters: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
407119 No alias Function unknown 0.02 Orthogroups_2024-Update
At2g19390 No alias Expressed protein [Source:UniProtKB/TrEMBL;Acc:O64572] 0.03 Orthogroups_2024-Update
Bradi2g39470 No alias Function unknown 0.01 Orthogroups_2024-Update
GRMZM2G013100 No alias Function unknown 0.02 Orthogroups_2024-Update
GRMZM2G142456 No alias Function unknown 0.06 Orthogroups_2024-Update
Glyma.12G088600 No alias Function unknown 0.05 Orthogroups_2024-Update
Glyma.13G106700 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.15G172400 No alias Function unknown 0.07 Orthogroups_2024-Update
Glyma.20G110300 No alias Function unknown 0.02 Orthogroups_2024-Update
HORVU1Hr1G060010.4 No alias component *(ADA3) of SAGA transcription co-activator complex 0.05 Orthogroups_2024-Update
MA_107341g0010 No alias (at4g29790 : 417.0) unknown protein; BEST Arabidopsis... 0.05 Orthogroups_2024-Update
Mp1g06630.1 No alias component ADA3 of SAGA transcription co-activator complex 0.03 Orthogroups_2024-Update
PSME_00024678-RA No alias (at4g29790 : 534.0) unknown protein; BEST Arabidopsis... 0.07 Orthogroups_2024-Update
Seita.3G069600.1 No alias component *(ADA3) of SAGA transcription co-activator complex 0.11 Orthogroups_2024-Update
Seita.3G278300.1 No alias component *(ADA3) of SAGA transcription co-activator complex 0.09 Orthogroups_2024-Update
Sobic.003G422500.1 No alias component *(ADA3) of SAGA transcription co-activator complex 0.03 Orthogroups_2024-Update
Sobic.009G005500.1 No alias component *(ADA3) of SAGA transcription co-activator complex 0.04 Orthogroups_2024-Update
Solyc07g040980 No alias Serine/arginine repetitive matrix protein 2 isoform 2... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004659 prenyltransferase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008318 protein prenyltransferase activity IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
BP GO:0018342 protein prenylation IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0097354 prenylation IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!