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  5. Bradi2g35830

Bradi2g35830


Description : cullin 1


Gene families : OG_42_0000877 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000877_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g35830
Cluster HCCA clusters: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Cre17.g734400 No alias cullin 1 0.03 Orthogroups_2024-Update
Glyma.15G154000 No alias cullin 1 0.03 Orthogroups_2024-Update
HORVU1Hr1G020390.1 No alias scaffold component *(CUL1) of SCF E3 ubiquitin ligase complexes 0.03 Orthogroups_2024-Update
LOC_Os01g27150 No alias cullin, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g05700 No alias cullin, putative, expressed 0.03 Orthogroups_2024-Update
Potri.008G224075 No alias cullin 1 0.03 Orthogroups_2024-Update
Potri.010G023800 No alias cullin 1 0.03 Orthogroups_2024-Update
Seita.3G037700.1 No alias scaffold component *(CUL1) of SCF E3 ubiquitin ligase complexes 0.03 Orthogroups_2024-Update
Seita.5G167800.1 No alias scaffold component *(CUL1) of SCF E3 ubiquitin ligase complexes 0.07 Orthogroups_2024-Update
Solyc06g084520 No alias Cul1 0.02 Orthogroups_2024-Update
Sopen06g035900 No alias Cullin family 0.03 Orthogroups_2024-Update
evm.model.contig_865.5 No alias (at4g02570 : 253.0) Encodes a cullin that is a component... 0.02 Orthogroups_2024-Update
evm.model.tig00020563.191 No alias (at4g02570 : 445.0) Encodes a cullin that is a component... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA InterProScan predictions
MF GO:0031625 ubiquitin protein ligase binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003714 transcription corepressor activity IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006475 internal protein amino acid acetylation IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
BP GO:0016573 histone acetylation IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
BP GO:0018393 internal peptidyl-lysine acetylation IEP Predicted GO
BP GO:0018394 peptidyl-lysine acetylation IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR019559 Cullin_neddylation_domain 674 736
IPR001373 Cullin_N 15 647
No external refs found!