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  5. Bradi2g36380

Bradi2g36380


Description : Homeotic gene regulator


Gene families : OG_42_0000148 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000148_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g36380
Cluster HCCA clusters: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
440203 No alias chromatin-remodeling protein 11 0.02 Orthogroups_2024-Update
A4A49_34446 No alias chromatin structure-remodeling complex protein syd 0.03 Orthogroups_2024-Update
AC235535.1_FG001 No alias chromatin-remodeling protein 11 0.04 Orthogroups_2024-Update
At5g66750 No alias ATP-dependent DNA helicase DDM1... 0.02 Orthogroups_2024-Update
Cre03.g179300 No alias chromatin remodeling 5 0.02 Orthogroups_2024-Update
Cre07.g325700 No alias transcription regulatory protein SNF2, putative 0.02 Orthogroups_2024-Update
GRMZM2G049168 No alias SNF2 domain-containing protein / helicase... 0.04 Orthogroups_2024-Update
Glyma.02G281000 No alias chromatin remodeling 5 0.02 Orthogroups_2024-Update
Glyma.04G062400 No alias chromatin remodeling factor CHD3 (PICKLE) 0.04 Orthogroups_2024-Update
Glyma.06G063400 No alias chromatin remodeling factor CHD3 (PICKLE) 0.03 Orthogroups_2024-Update
Glyma.17G023600 No alias chromatin remodeling factor17 0.04 Orthogroups_2024-Update
HORVU2Hr1G022450.1 No alias component *(CHR5) of SAGA transcription co-activator... 0.04 Orthogroups_2024-Update
MA_8990972g0010 No alias (at2g25170 : 180.0) Encodes a SWI/SWF nuclear-localized... 0.02 Orthogroups_2024-Update
PSME_00001767-RA No alias (at5g66750 : 797.0) Protein is similar to SWI2/SNF2... 0.02 Orthogroups_2024-Update
PSME_00009909-RA No alias (at2g25170 : 296.0) Encodes a SWI/SWF nuclear-localized... 0.03 Orthogroups_2024-Update
PSME_00020446-RA No alias (at2g44980 : 160.0) SNF2 domain-containing protein /... 0.02 Orthogroups_2024-Update
Potri.001G123400 No alias chromatin remodeling 4 0.03 Orthogroups_2024-Update
Potri.009G047800 No alias chromatin remodeling 5 0.03 Orthogroups_2024-Update
Potri.010G019800 No alias chromatin-remodeling protein 11 0.02 Orthogroups_2024-Update
Pp1s235_76V6 No alias chromatin remodeling complex subunit 0.04 Orthogroups_2024-Update
Solyc06g065730 No alias chromatin remodeling factor CHD3 (PICKLE) (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
evm.model.tig00000217.24 No alias (at2g28290 : 140.0) Encodes a SWI2/SNF2-like protein in... 0.01 Orthogroups_2024-Update
evm.model.tig00000350.9 No alias (at2g25170 : 212.0) Encodes a SWI/SWF nuclear-localized... 0.01 Orthogroups_2024-Update
evm.model.tig00020848.66 No alias (at2g44980 : 201.0) SNF2 domain-containing protein /... 0.01 Orthogroups_2024-Update
evm.model.tig00020960.24 No alias (at2g13370 : 202.0) chromatin remodeling 5 (CHR5);... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
MF GO:0042393 histone binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0003873 6-phosphofructo-2-kinase activity IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006000 fructose metabolic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0042278 purine nucleoside metabolic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
BP GO:0046128 purine ribonucleoside metabolic process IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR029295 SnAC 921 992
IPR001650 Helicase_C 728 841
IPR000330 SNF2_N 438 709
No external refs found!