Sopen06g033410

Description : Ankyrin repeats (3 copies)

Gene families : OG_42_0006386 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006386_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen06g033410
Cluster	HCCA clusters: Cluster_110

Target	Alias	Description	ECC score	Gene Family Method
Brara.I03841.1	No alias	regulatory factor *(TZF) of mRNA stress granule formation	0.02	Orthogroups_2024-Update
Glyma.14G016300	No alias	salt-inducible zinc finger 1	0.02	Orthogroups_2024-Update
Glyma.14G194100	No alias	zinc finger (CCCH-type) family protein	0.04	Orthogroups_2024-Update
Potri.001G252600	No alias	zinc finger (CCCH-type) family protein	0.03	Orthogroups_2024-Update
Solyc06g082010	No alias	Zinc finger transcription factor 48	0.04	Orthogroups_2024-Update
Sopen05g031090	No alias	Ankyrin repeats (3 copies)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	IEA	InterProScan predictions

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR020683	Ankyrin_rpt-contain_dom	71	144
IPR000571	Znf_CCCH	272	292

External Links

No external refs found!