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  5. Bradi2g43797

Bradi2g43797


Description : XH/XS domain-containing protein


Gene families : OG_42_0000478 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000478_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g43797
Cluster HCCA clusters: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
Bradi2g35460 No alias XH/XS domain-containing protein 0.05 Orthogroups_2024-Update
Bradi2g43557 No alias XH/XS domain-containing protein 0.05 Orthogroups_2024-Update
Brara.G03701.1 No alias Unknown function 0.05 Orthogroups_2024-Update
LOC_Os03g39940 No alias retrotransposon protein, putative, Ty3-gypsy subclass, expressed 0.03 Orthogroups_2024-Update
Sobic.009G048300.2 No alias regulatory protein of DNA methylation pathway *(IDN/IDP) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0031047 gene silencing by RNA IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0030008 TRAPP complex IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR005379 Uncharacterised_XH 468 598
IPR005380 XS_domain 81 189
No external refs found!