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  5. Bradi2g45350

Bradi2g45350


Description : TRICHOME BIREFRINGENCE-LIKE 21


Gene families : OG_42_0000195 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000195_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g45350
Cluster HCCA clusters: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
At1g01430 No alias Protein trichome birefringence-like 25... 0.03 Orthogroups_2024-Update
At1g70230 No alias TBL27 [Source:UniProtKB/TrEMBL;Acc:A0A178WG99] 0.04 Orthogroups_2024-Update
Bradi1g44920 No alias TRICHOME BIREFRINGENCE-LIKE 22 0.04 Orthogroups_2024-Update
Brara.G02951.1 No alias xyloglucan O-acetyltransferase *(AXY4) 0.04 Orthogroups_2024-Update
Brara.K00788.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G061283 No alias TRICHOME BIREFRINGENCE-LIKE 25 0.02 Orthogroups_2024-Update
GRMZM2G305439 No alias TRICHOME BIREFRINGENCE-LIKE 21 0.02 Orthogroups_2024-Update
Glyma.13G230100 No alias TRICHOME BIREFRINGENCE-LIKE 21 0.03 Orthogroups_2024-Update
Glyma.19G041800 No alias TRICHOME BIREFRINGENCE-LIKE 19 0.02 Orthogroups_2024-Update
LOC_Os01g46410 No alias leaf senescence related protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_245850g0010 No alias (at4g23790 : 327.0) Encodes a member of the TBL... 0.02 Orthogroups_2024-Update
PSME_00036268-RA No alias (at4g23790 : 343.0) Encodes a member of the TBL... 0.03 Orthogroups_2024-Update
Potri.010G095700 No alias TRICHOME BIREFRINGENCE-LIKE 27 0.02 Orthogroups_2024-Update
Solyc02g089690 No alias Trichome birefringence-like 19 (AHRD V3.3 *** A0A061EH35_THECC) 0.03 Orthogroups_2024-Update
Sopen02g034400 No alias GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004097 catechol oxidase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR025846 PMR5_N_dom 58 110
IPR026057 PC-Esterase 111 402
No external refs found!