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  5. Bradi2g54300

Bradi2g54300


Description : ABC-2 type transporter family protein


Gene families : OG_42_0001141 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001141_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g54300
Cluster HCCA clusters: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
Brara.G01658.1 No alias subfamily ABCG transporter & jasmonic acid transporter *(JAT) 0.02 Orthogroups_2024-Update
HORVU5Hr1G021120.1 No alias subfamily ABCG transporter & jasmonic acid transporter *(JAT) 0.03 Orthogroups_2024-Update
LOC_Os01g61940 No alias white-brown complex homolog protein, putative, expressed 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 133 285
IPR013525 ABC_2_trans 448 656
No external refs found!