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  5. Bradi2g54690

Bradi2g54690


Description : laccase 17


Gene families : OG_42_0000051 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000051_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g54690
Cluster HCCA clusters: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
105894 No alias laccase 17 0.02 Orthogroups_2024-Update
404333 No alias laccase 12 0.02 Orthogroups_2024-Update
A4A49_13107 No alias laccase-14 0.03 Orthogroups_2024-Update
A4A49_15209 No alias laccase-4 0.05 Orthogroups_2024-Update
A4A49_18568 No alias laccase-4 0.03 Orthogroups_2024-Update
A4A49_20277 No alias laccase-11 0.04 Orthogroups_2024-Update
A4A49_21564 No alias laccase-15 0.03 Orthogroups_2024-Update
A4A49_34983 No alias laccase-4 0.06 Orthogroups_2024-Update
At2g38080 No alias Laccase-4 [Source:UniProtKB/Swiss-Prot;Acc:O80434] 0.03 Orthogroups_2024-Update
At5g60020 No alias Laccase-17 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJD5] 0.02 Orthogroups_2024-Update
Brara.B00033.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.04 Orthogroups_2024-Update
Brara.B00087.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.03 Orthogroups_2024-Update
Brara.B01051.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.06 Orthogroups_2024-Update
Brara.D02326.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.04 Orthogroups_2024-Update
Glyma.03G077900 No alias Laccase/Diphenol oxidase family protein 0.03 Orthogroups_2024-Update
Glyma.11G233400 No alias laccase 5 0.03 Orthogroups_2024-Update
Glyma.18G177200 No alias laccase 17 0.02 Orthogroups_2024-Update
HORVU1Hr1G072470.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.03 Orthogroups_2024-Update
HORVU3Hr1G086200.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.03 Orthogroups_2024-Update
LOC_Os01g44330 No alias laccase precursor protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os01g62490 No alias laccase precursor protein, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os03g16610 No alias laccase precursor protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g38420 No alias laccase precursor protein, putative, expressed 0.06 Orthogroups_2024-Update
MA_10430789g0010 No alias (at5g05390 : 429.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
MA_75861g0010 No alias (at1g18140 : 648.0) putative laccase, a member of... 0.02 Orthogroups_2024-Update
PSME_00001502-RA No alias (at2g38080 : 615.0) Encodes a protein with similarity to... 0.04 Orthogroups_2024-Update
PSME_00003270-RA No alias (at5g60020 : 723.0) putative laccase, a member of... 0.05 Orthogroups_2024-Update
PSME_00005164-RA No alias (at5g05390 : 649.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00019807-RA No alias (at5g05390 : 589.0) putative laccase, a member of... 0.02 Orthogroups_2024-Update
PSME_00024478-RA No alias (at5g05390 : 702.0) putative laccase, a member of... 0.04 Orthogroups_2024-Update
PSME_00027592-RA No alias (at2g40370 : 659.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00028271-RA No alias (at5g05390 : 745.0) putative laccase, a member of... 0.04 Orthogroups_2024-Update
PSME_00031560-RA No alias (at5g05390 : 678.0) putative laccase, a member of... 0.02 Orthogroups_2024-Update
PSME_00042270-RA No alias (at5g05390 : 793.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00042445-RA No alias (at5g03260 : 679.0) putative laccase, a member of... 0.02 Orthogroups_2024-Update
PSME_00042619-RA No alias (at5g05390 : 581.0) putative laccase, a member of... 0.02 Orthogroups_2024-Update
PSME_00043660-RA No alias (at5g03260 : 768.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00043959-RA No alias (at5g03260 : 782.0) putative laccase, a member of... 0.06 Orthogroups_2024-Update
PSME_00044158-RA No alias (at2g40370 : 673.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00044448-RA No alias (at5g05390 : 808.0) putative laccase, a member of... 0.04 Orthogroups_2024-Update
Potri.006G087100 No alias laccase 17 0.07 Orthogroups_2024-Update
Potri.006G087500 No alias laccase 17 0.04 Orthogroups_2024-Update
Potri.007G023300 No alias laccase 11 0.07 Orthogroups_2024-Update
Potri.008G064000 No alias Laccase/Diphenol oxidase family protein 0.04 Orthogroups_2024-Update
Potri.008G073700 No alias laccase 5 0.06 Orthogroups_2024-Update
Potri.009G034500 No alias laccase 2 0.03 Orthogroups_2024-Update
Potri.009G102700 No alias laccase 11 0.04 Orthogroups_2024-Update
Potri.010G193100 No alias Laccase/Diphenol oxidase family protein 0.03 Orthogroups_2024-Update
Potri.011G120300 No alias laccase 17 0.06 Orthogroups_2024-Update
Potri.016G106000 No alias laccase 7 0.04 Orthogroups_2024-Update
Potri.016G112000 No alias Laccase/Diphenol oxidase family protein 0.03 Orthogroups_2024-Update
Pp1s17_180V6 No alias laccase 90c 0.03 Orthogroups_2024-Update
Seita.8G252500.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.04 Orthogroups_2024-Update
Seita.9G453900.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.04 Orthogroups_2024-Update
Sobic.001G422300.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.05 Orthogroups_2024-Update
Sobic.003G352700.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.04 Orthogroups_2024-Update
Solyc02g062650 No alias Laccase (AHRD V3.3 *** I1J8U1_SOYBN) 0.02 Orthogroups_2024-Update
Solyc09g011050 No alias No description available 0.02 Orthogroups_2024-Update
Solyc09g011960 No alias Laccase (AHRD V3.3 *** A0A067L6R3_JATCU) 0.03 Orthogroups_2024-Update
Solyc09g014240 No alias Laccase (AHRD V3.3 *** P93366_TOBAC) 0.04 Orthogroups_2024-Update
Sopen02g029800 No alias Multicopper oxidase 0.02 Orthogroups_2024-Update
Sopen06g033640 No alias Multicopper oxidase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001117 Cu-oxidase 161 313
IPR011706 Cu-oxidase_2 438 561
IPR011707 Cu-oxidase_3 35 148
No external refs found!