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  5. Bradi2g55217

Bradi2g55217


Description : Duplicated homeodomain-like superfamily protein


Gene families : OG_42_0000088 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000088_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g55217
Cluster HCCA clusters: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
84280 No alias Duplicated homeodomain-like superfamily protein 0.06 Orthogroups_2024-Update
At1g19000 No alias AT1G19000 protein [Source:UniProtKB/TrEMBL;Acc:Q9LMC7] 0.02 Orthogroups_2024-Update
At5g58900 No alias Homeodomain-like transcriptional regulator... 0.02 Orthogroups_2024-Update
GRMZM2G088524 No alias myb-like transcription factor family protein 0.02 Orthogroups_2024-Update
GRMZM2G091201 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.01G112700 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.05G013000 No alias Duplicated homeodomain-like superfamily protein 0.06 Orthogroups_2024-Update
Glyma.07G146300 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.17G144100 No alias myb-like transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.18G134200 No alias Duplicated homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Mp4g22430.1 No alias transcription factor (MYB-related) 0.02 Orthogroups_2024-Update
PSME_00029430-RA No alias (at5g47390 : 224.0) myb-like transcription factor family... 0.07 Orthogroups_2024-Update
PSME_00053886-RA No alias (at2g38090 : 199.0) Duplicated homeodomain-like... 0.02 Orthogroups_2024-Update
Potri.010G240800 No alias Duplicated homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Seita.3G225500.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.04 Orthogroups_2024-Update
Seita.5G135900.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Solyc09g007570 No alias Myb family transcription factor family protein (AHRD... 0.02 Orthogroups_2024-Update
Solyc12g008800 No alias Myb-like transcription factor family protein, putative... 0.02 Orthogroups_2024-Update
Sopen05g033680 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen06g010700 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen09g007130 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen11g002650 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004126 cytidine deaminase activity IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predicted GO
BP GO:0006216 cytidine catabolic process IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009164 nucleoside catabolic process IEP Predicted GO
BP GO:0009972 cytidine deamination IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
BP GO:0019439 aromatic compound catabolic process IEP Predicted GO
CC GO:0031082 BLOC complex IEP Predicted GO
CC GO:0031083 BLOC-1 complex IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034655 nucleobase-containing compound catabolic process IEP Predicted GO
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Predicted GO
BP GO:0042454 ribonucleoside catabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044270 cellular nitrogen compound catabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
CC GO:0044445 cytosolic part IEP Predicted GO
BP GO:0046087 cytidine metabolic process IEP Predicted GO
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Predicted GO
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0046700 heterocycle catabolic process IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901361 organic cyclic compound catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
BP GO:1901658 glycosyl compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 150 194
No external refs found!