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  5. Bradi2g56397

Bradi2g56397


Description : Major facilitator superfamily protein


Gene families : OG_42_0000015 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000015_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi2g56397
Cluster HCCA clusters: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
Brara.B03084.1 No alias anion transporter *(NRT1/PTR) 0.04 Orthogroups_2024-Update
Brara.C04569.1 No alias anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
Brara.E00726.1 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
Glyma.05G136300 No alias peptide transporter 2 0.04 Orthogroups_2024-Update
Glyma.18G033700 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
Glyma.18G064900 No alias peptide transporter 1 0.02 Orthogroups_2024-Update
PSME_00017195-RA No alias (at3g54140 : 821.0) Encodes a di- and tri-peptide... 0.03 Orthogroups_2024-Update
PSME_00017196-RA No alias (at5g01180 : 407.0) Encodes a dipeptide transporter... 0.02 Orthogroups_2024-Update
PSME_00044025-RA No alias (at2g37900 : 373.0) Major facilitator superfamily... 0.02 Orthogroups_2024-Update
PSME_00048093-RA No alias (at5g46040 : 575.0) Major facilitator superfamily... 0.02 Orthogroups_2024-Update
Potri.003G111500 No alias nitrate transporter 1.1 0.02 Orthogroups_2024-Update
Potri.008G061100 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Pp1s173_71V6 No alias peptide transport-like protein 0.02 Orthogroups_2024-Update
Seita.7G221900.1 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
Solyc12g042300 No alias Peptide transporter (AHRD V3.3 *** W9SG60_9ROSA) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0022857 transmembrane transporter activity IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000109 POT_fam 270 461
IPR000109 POT_fam 103 249
No external refs found!