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Description : HEAT/U-box domain-containing protein
Gene families : OG_42_0006380 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006380_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brachypodium release: Bradi2g62760 | |
| Cluster | HCCA clusters: Cluster_225 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Kfl01119_0010 | kfl01119_0010_v1.1 | (at5g58410 : 297.0) HEAT/U-box domain-containing... | 0.01 | Orthogroups_2024-Update | |
| MA_10427527g0010 | No alias | (at5g58410 : 402.0) HEAT/U-box domain-containing... | 0.04 | Orthogroups_2024-Update | |
| Mp7g07340.1 | No alias | E3 ubiquitin ligase component LTN1 of... | 0.03 | Orthogroups_2024-Update | |
| PSME_00014893-RA | No alias | (at5g58410 : 1026.0) HEAT/U-box domain-containing... | 0.03 | Orthogroups_2024-Update | |
| PSME_00014894-RA | No alias | (at5g58410 : 169.0) HEAT/U-box domain-containing... | 0.02 | Orthogroups_2024-Update | |
| Pp1s39_126V6 | No alias | ring finger protein 160 | 0.02 | Orthogroups_2024-Update | |
| Seita.8G025600.1 | No alias | E3 ubiquitin ligase component *(LTN1) of... | 0.06 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004386 | helicase activity | IEP | Predicted GO |
| CC | GO:0005634 | nucleus | IEP | Predicted GO |
| CC | GO:0005694 | chromosome | IEP | Predicted GO |
| BP | GO:0005985 | sucrose metabolic process | IEP | Predicted GO |
| BP | GO:0006810 | transport | IEP | Predicted GO |
| BP | GO:0006886 | intracellular protein transport | IEP | Predicted GO |
| BP | GO:0006888 | ER to Golgi vesicle-mediated transport | IEP | Predicted GO |
| BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to ER | IEP | Predicted GO |
| BP | GO:0006904 | vesicle docking involved in exocytosis | IEP | Predicted GO |
| BP | GO:0008104 | protein localization | IEP | Predicted GO |
| MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
| MF | GO:0008536 | Ran GTPase binding | IEP | Predicted GO |
| BP | GO:0015031 | protein transport | IEP | Predicted GO |
| BP | GO:0015833 | peptide transport | IEP | Predicted GO |
| MF | GO:0016157 | sucrose synthase activity | IEP | Predicted GO |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Predicted GO |
| BP | GO:0016579 | protein deubiquitination | IEP | Predicted GO |
| CC | GO:0016592 | mediator complex | IEP | Predicted GO |
| MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Predicted GO |
| BP | GO:0022406 | membrane docking | IEP | Predicted GO |
| CC | GO:0030117 | membrane coat | IEP | Predicted GO |
| CC | GO:0030119 | AP-type membrane coat adaptor complex | IEP | Predicted GO |
| CC | GO:0030120 | vesicle coat | IEP | Predicted GO |
| CC | GO:0030127 | COPII vesicle coat | IEP | Predicted GO |
| CC | GO:0030131 | clathrin adaptor complex | IEP | Predicted GO |
| CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
| BP | GO:0033036 | macromolecule localization | IEP | Predicted GO |
| MF | GO:0035091 | phosphatidylinositol binding | IEP | Predicted GO |
| MF | GO:0036459 | thiol-dependent ubiquitinyl hydrolase activity | IEP | Predicted GO |
| BP | GO:0042886 | amide transport | IEP | Predicted GO |
| CC | GO:0044424 | intracellular part | IEP | Predicted GO |
| CC | GO:0044425 | membrane part | IEP | Predicted GO |
| CC | GO:0044433 | cytoplasmic vesicle part | IEP | Predicted GO |
| CC | GO:0044444 | cytoplasmic part | IEP | Predicted GO |
| CC | GO:0044464 | cell part | IEP | Predicted GO |
| BP | GO:0045184 | establishment of protein localization | IEP | Predicted GO |
| BP | GO:0046907 | intracellular transport | IEP | Predicted GO |
| BP | GO:0048193 | Golgi vesicle transport | IEP | Predicted GO |
| BP | GO:0048278 | vesicle docking | IEP | Predicted GO |
| BP | GO:0051179 | localization | IEP | Predicted GO |
| BP | GO:0051234 | establishment of localization | IEP | Predicted GO |
| BP | GO:0051640 | organelle localization | IEP | Predicted GO |
| BP | GO:0051641 | cellular localization | IEP | Predicted GO |
| BP | GO:0051649 | establishment of localization in cell | IEP | Predicted GO |
| BP | GO:0070646 | protein modification by small protein removal | IEP | Predicted GO |
| BP | GO:0071702 | organic substance transport | IEP | Predicted GO |
| BP | GO:0071705 | nitrogen compound transport | IEP | Predicted GO |
| CC | GO:0098796 | membrane protein complex | IEP | Predicted GO |
| MF | GO:0101005 | ubiquitinyl hydrolase activity | IEP | Predicted GO |
| BP | GO:0140029 | exocytic process | IEP | Predicted GO |
| BP | GO:0140056 | organelle localization by membrane tethering | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 1871 | 1919 |
| No external refs found! |