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  5. Sopen07g001380

Sopen07g001380


Description : Helix-loop-helix DNA-binding domain


Gene families : OG_42_0000630 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000630_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen07g001380
Cluster HCCA clusters: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
425336 No alias LJRHL1-like 3 0.02 Orthogroups_2024-Update
LOC_Os06g09370 No alias PTF1, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00015862-RA No alias (at5g58010 : 119.0) Encodes a basic helix-loop-helix... 0.02 Orthogroups_2024-Update
Seita.1G350600.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
Seita.4G041700.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
Seita.6G063700.1 No alias bHLH-type transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 268 313
No external refs found!