1. Home
  2. Species
  3. Brachypodium distachyon
  4. Sequence
  5. Bradi3g03945

Bradi3g03945


Description : photosystem II reaction center protein E


Gene families : OG_42_0004228 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004228_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g03945
Cluster HCCA clusters: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
137822 No alias photosystem II reaction center protein E 0.05 Orthogroups_2024-Update
Bradi1g39213 No alias photosystem II reaction center protein E 0.08 Orthogroups_2024-Update
Bradi5g23871 No alias photosystem II reaction center protein E 0.08 Orthogroups_2024-Update
Seita.J013200.1 No alias component alpha *(PsbE) of PS-II cytochrome b559... 0.06 Orthogroups_2024-Update
Seita.J021600.1 No alias component alpha *(PsbE) of PS-II cytochrome b559... 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA InterProScan predictions
BP GO:0015979 photosynthesis IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity IEP Predicted GO
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016168 chlorophyll binding IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP Predicted GO
BP GO:0019684 photosynthesis, light reaction IEP Predicted GO
CC GO:0031360 intrinsic component of thylakoid membrane IEP Predicted GO
CC GO:0031361 integral component of thylakoid membrane IEP Predicted GO
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predicted GO
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR013081 PSII_cyt_b559_N 6 34
IPR013082 PSII_cytb559_asu_lum 42 79
No external refs found!