Bradi3g06562

Description : ethylene responsive element binding factor 3

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi3g06562
Cluster	HCCA clusters: Cluster_95

Target	Alias	Description	ECC score	Gene Family Method
A4A49_03112	No alias	ethylene-responsive transcription factor crf4	0.02	Orthogroups_2024-Update
A4A49_16244	No alias	ethylene-responsive transcription factor rap2-11	0.02	Orthogroups_2024-Update
A4A49_16579	No alias	ethylene-responsive transcription factor abr1	0.02	Orthogroups_2024-Update
A4A49_20932	No alias	ethylene-responsive transcription factor erf114	0.04	Orthogroups_2024-Update
A4A49_24041	No alias	ethylene-responsive transcription factor 1a	0.02	Orthogroups_2024-Update
A4A49_30738	No alias	ethylene-responsive transcription factor abr1	0.02	Orthogroups_2024-Update
AC187157.4_FG001	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
At1g12610	No alias	Dehydration-responsive element-binding protein 1F...	0.03	Orthogroups_2024-Update
At1g28370	No alias	ERF domain protein 11 [Source:TAIR;Acc:AT1G28370]	0.02	Orthogroups_2024-Update
At2g33710	No alias	Integrase-type DNA-binding superfamily protein...	0.04	Orthogroups_2024-Update
At3g23230	No alias	Ethylene-responsive transcription factor ERF098...	0.05	Orthogroups_2024-Update
At4g11140	No alias	Ethylene-responsive transcription factor CRF1...	0.03	Orthogroups_2024-Update
Bradi2g52370	No alias	erf domain protein 9	0.04	Orthogroups_2024-Update
Bradi3g18070	No alias	ethylene response factor 7	0.02	Orthogroups_2024-Update
Bradi3g50490	No alias	ethylene responsive element binding factor 1	0.03	Orthogroups_2024-Update
Brara.A00380.1	No alias	subgroup ERF-X transcription factor	0.02	Orthogroups_2024-Update
Brara.C00977.1	No alias	subgroup ERF-II transcription factor *(ERF16/17/18)	0.02	Orthogroups_2024-Update
Brara.D01564.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.H01375.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Brara.I00861.1	No alias	subgroup ERF-II-DEAR transcription factor	0.03	Orthogroups_2024-Update
Cre14.g620500	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
GRMZM2G019443	No alias	related to AP2 11	0.04	Orthogroups_2024-Update
GRMZM2G053503	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
GRMZM2G421033	No alias	DREB and EAR motif protein 3	0.02	Orthogroups_2024-Update
GRMZM2G434203	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.06G028300	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.06G163700	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.07G027000	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.07G244867	No alias	ethylene-responsive element binding protein	0.04	Orthogroups_2024-Update
Glyma.07G250100	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.10G007000	No alias	ethylene response factor 1	0.03	Orthogroups_2024-Update
Glyma.13G236600	No alias	ERF domain protein 12	0.04	Orthogroups_2024-Update
Glyma.13G355700	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.20G172800	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
HORVU1Hr1G077680.2	No alias	subgroup ERF-IX transcription factor	0.04	Orthogroups_2024-Update
HORVU5Hr1G080340.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
LOC_Os04g46400	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os04g46440	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
MA_10433094g0010	No alias	(at1g74930 : 123.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_120531g0010	No alias	(at1g28360 : 97.1) encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
MA_4032g0010	No alias	(q9sxs8\|erf3_tobac : 85.1) Ethylene-responsive...	0.04	Orthogroups_2024-Update
MA_65877g0010	No alias	(at3g16280 : 101.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
PSME_00008897-RA	No alias	(at4g17500 : 88.2) Encodes a member of the ERF (ethylene...	0.05	Orthogroups_2024-Update
PSME_00009547-RA	No alias	(at4g17500 : 103.0) Encodes a member of the ERF...	0.02	Orthogroups_2024-Update
PSME_00037531-RA	No alias	(at5g61890 : 123.0) encodes a member of the ERF...	0.05	Orthogroups_2024-Update
PSME_00037533-RA	No alias	(at5g61890 : 108.0) encodes a member of the ERF...	0.04	Orthogroups_2024-Update
PSME_00040934-RA	No alias	(at5g64750 : 100.0) Encodes a putative transcription...	0.04	Orthogroups_2024-Update
PSME_00041851-RA	No alias	(at1g21910 : 102.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
PSME_00051454-RA	No alias	(at1g19210 : 98.6) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
PSME_00052454-RA	No alias	no hits & (original description: no original description)	0.04	Orthogroups_2024-Update
Potri.003G050700	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.003G161000	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.008G215600	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Potri.010G186400	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.017G055400	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.018G021900	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Pp1s136_219V6	No alias	ap2 erf domain-containing transcription factor	0.04	Orthogroups_2024-Update
Pp1s15_186V6	No alias	transcriptional factor	0.05	Orthogroups_2024-Update
Pp1s20_184V6	No alias	ap2 erf domain-containing transcription factor	0.03	Orthogroups_2024-Update
Pp1s233_111V6	No alias	ap2 erf domain-containing transcription factor	0.04	Orthogroups_2024-Update
Pp1s259_104V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s6_75V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Seita.2G280400.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.5G320400.1	No alias	subgroup ERF-IX transcription factor	0.04	Orthogroups_2024-Update
Seita.6G235100.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.002G350500.1	No alias	transcription factor *(ERN1) & subgroup ERF-V...	0.03	Orthogroups_2024-Update
Sobic.004G179900.1	No alias	subgroup ERF-III transcription factor	0.06	Orthogroups_2024-Update
Sobic.005G051200.2	No alias	subgroup ERF-X transcription factor	0.04	Orthogroups_2024-Update
Solyc04g014530	No alias	Ethylene Response Factor C.2	0.03	Orthogroups_2024-Update
Solyc07g042230	No alias	Ethylene-responsive transcription factor (AHRD V3.3 -...	0.03	Orthogroups_2024-Update
Solyc09g089910	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.02	Orthogroups_2024-Update
Sopen03g005150	No alias	AP2 domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	Predicted GO
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	Predicted GO
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	Predicted GO
BP	GO:0006397	mRNA processing	IEP	Predicted GO
BP	GO:0008380	RNA splicing	IEP	Predicted GO
BP	GO:0016071	mRNA metabolic process	IEP	Predicted GO
MF	GO:0020037	heme binding	IEP	Predicted GO
MF	GO:0046906	tetrapyrrole binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	20	69

External Links

No external refs found!

Bradi3g06562

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation