Bradi3g25670

Description : cycling DOF factor 1

Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi3g25670
Cluster	HCCA clusters: Cluster_37

Target	Alias	Description	ECC score	Gene Family Method
A4A49_00536	No alias	dof zinc finger protein dof5.7	0.02	Orthogroups_2024-Update
A4A49_04752	No alias	dof zinc finger protein dof3.5	0.03	Orthogroups_2024-Update
A4A49_12086	No alias	cyclic dof factor 2	0.04	Orthogroups_2024-Update
A4A49_12312	No alias	dof zinc finger protein dof2.1	0.02	Orthogroups_2024-Update
A4A49_13356	No alias	cyclic dof factor 3	0.04	Orthogroups_2024-Update
At3g47500	No alias	Cyclic dof factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFV3]	0.02	Orthogroups_2024-Update
At4g00940	No alias	Dof zinc finger protein DOF4.1...	0.02	Orthogroups_2024-Update
At5g65590	No alias	SCAP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UIB2]	0.03	Orthogroups_2024-Update
Bradi3g51510	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Brara.B00052.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.C01888.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.F01753.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.F02115.1	No alias	transcription factor *(DOF)	0.05	Orthogroups_2024-Update
Brara.I00088.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
GRMZM2G042218	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
GRMZM2G146283	No alias	TARGET OF MONOPTEROS 6	0.03	Orthogroups_2024-Update
Glyma.01G049400	No alias	cycling DOF factor 3	0.03	Orthogroups_2024-Update
Glyma.02G108600	No alias	cycling DOF factor 2	0.04	Orthogroups_2024-Update
Glyma.04G168300	No alias	cycling DOF factor 3	0.04	Orthogroups_2024-Update
Glyma.05G018100	No alias	OBF binding protein 4	0.03	Orthogroups_2024-Update
Glyma.05G025900	No alias	cycling DOF factor 3	0.03	Orthogroups_2024-Update
Glyma.06G124300	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.06G194800	No alias	cycling DOF factor 3	0.02	Orthogroups_2024-Update
Glyma.07G053900	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
Glyma.07G229600	No alias	cycling DOF factor 2	0.04	Orthogroups_2024-Update
Glyma.13G062500	No alias	cycling DOF factor 2	0.02	Orthogroups_2024-Update
Glyma.13G230200	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.13G241900	No alias	Dof-type zinc finger DNA-binding family protein	0.04	Orthogroups_2024-Update
Glyma.15G071400	No alias	Dof-type zinc finger DNA-binding family protein	0.04	Orthogroups_2024-Update
Glyma.15G082400	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.16G022900	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.20G035200	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
HORVU1Hr1G074140.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
HORVU2Hr1G095390.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
HORVU4Hr1G013890.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Kfl00762_0030	kfl00762_0030_v1.1	(at5g39660 : 127.0) Dof-type zinc finger...	0.02	Orthogroups_2024-Update
LOC_Os01g17000	No alias	expressed protein	0.03	Orthogroups_2024-Update
MA_16692g0010	No alias	(at5g60200 : 130.0) Encodes a Dof-type transcription...	0.02	Orthogroups_2024-Update
MA_18267g0010	No alias	(at5g62940 : 141.0) HCA2 induces the formation of...	0.02	Orthogroups_2024-Update
MA_56828g0010	No alias	(at5g02460 : 145.0) Dof-type zinc finger DNA-binding...	0.02	Orthogroups_2024-Update
MA_83624g0010	No alias	(at5g60200 : 114.0) Encodes a Dof-type transcription...	0.04	Orthogroups_2024-Update
PSME_00020524-RA	No alias	(at5g62940 : 135.0) HCA2 induces the formation of...	0.04	Orthogroups_2024-Update
PSME_00052342-RA	No alias	(at5g62940 : 135.0) HCA2 induces the formation of...	0.04	Orthogroups_2024-Update
PSME_00056872-RA	No alias	(at5g60200 : 116.0) Encodes a Dof-type transcription...	0.03	Orthogroups_2024-Update
Potri.004G046600	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
Potri.006G202500	No alias	Dof-type zinc finger DNA-binding family protein	0.04	Orthogroups_2024-Update
Potri.015G009300	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
Potri.016G069300	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Pp1s118_226V6	No alias	f-box family protein	0.02	Orthogroups_2024-Update
Pp1s149_180V6	No alias	cycling dof factor 2	0.03	Orthogroups_2024-Update
Seita.3G327800.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Sobic.001G489900.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Sobic.002G421900.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Sobic.009G014400.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
Solyc02g067230	No alias	Dof zinc finger protein3	0.04	Orthogroups_2024-Update
Solyc02g076850	No alias	Dof zinc finger protein4	0.02	Orthogroups_2024-Update
Solyc02g077950	No alias	Dof zinc finger protein5	0.03	Orthogroups_2024-Update
Solyc03g112930	No alias	Dof zinc finger protein (AHRD V3.3 *** A0A0B6VJP1_TOBAC)	0.04	Orthogroups_2024-Update
Solyc03g115940	No alias	Dof zinc finger protein (AHRD V3.3 *** C4B6D7_IPOBA)	0.04	Orthogroups_2024-Update
Solyc05g007880	No alias	Dof zinc finger protein (AHRD V3.3 *** W9S8B0_9ROSA)	0.03	Orthogroups_2024-Update
Solyc06g069760	No alias	Dof zinc finger protein 22	0.02	Orthogroups_2024-Update
Solyc06g076030	No alias	Dof zinc finger protein (AHRD V3.3 *** Q9M4G1_SOLTU)	0.02	Orthogroups_2024-Update
Sopen02g016410	No alias	Dof domain, zinc finger	0.03	Orthogroups_2024-Update
Sopen02g022800	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update
Sopen03g022580	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update
Sopen03g040210	No alias	Dof domain, zinc finger	0.03	Orthogroups_2024-Update
Sopen06g026650	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update
Sopen06g032440	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Predicted GO
MF	GO:0004096	catalase activity	IEP	Predicted GO
MF	GO:0004180	carboxypeptidase activity	IEP	Predicted GO
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	Predicted GO
MF	GO:0004564	beta-fructofuranosidase activity	IEP	Predicted GO
MF	GO:0004575	sucrose alpha-glucosidase activity	IEP	Predicted GO
MF	GO:0005506	iron ion binding	IEP	Predicted GO
BP	GO:0005985	sucrose metabolic process	IEP	Predicted GO
BP	GO:0006308	DNA catabolic process	IEP	Predicted GO
BP	GO:0008152	metabolic process	IEP	Predicted GO
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Predicted GO
MF	GO:0008238	exopeptidase activity	IEP	Predicted GO
BP	GO:0008272	sulfate transport	IEP	Predicted GO
MF	GO:0009916	alternative oxidase activity	IEP	Predicted GO
MF	GO:0010277	chlorophyllide a oxygenase [overall] activity	IEP	Predicted GO
MF	GO:0015116	sulfate transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015926	glucosidase activity	IEP	Predicted GO
MF	GO:0016157	sucrose synthase activity	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Predicted GO
MF	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors	IEP	Predicted GO
MF	GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	IEP	Predicted GO
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Predicted GO
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	Predicted GO
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	Predicted GO
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Predicted GO
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Predicted GO
MF	GO:0020037	heme binding	IEP	Predicted GO
MF	GO:0033743	peptide-methionine (R)-S-oxide reductase activity	IEP	Predicted GO
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	Predicted GO
MF	GO:0043169	cation binding	IEP	Predicted GO
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	Predicted GO
MF	GO:0046527	glucosyltransferase activity	IEP	Predicted GO
MF	GO:0046872	metal ion binding	IEP	Predicted GO
MF	GO:0046906	tetrapyrrole binding	IEP	Predicted GO
MF	GO:0046914	transition metal ion binding	IEP	Predicted GO
MF	GO:0048037	cofactor binding	IEP	Predicted GO
MF	GO:0051213	dioxygenase activity	IEP	Predicted GO
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Predicted GO
BP	GO:0055114	oxidation-reduction process	IEP	Predicted GO
MF	GO:0070008	serine-type exopeptidase activity	IEP	Predicted GO
BP	GO:0072348	sulfur compound transport	IEP	Predicted GO
MF	GO:0090599	alpha-glucosidase activity	IEP	Predicted GO
MF	GO:1901682	sulfur compound transmembrane transporter activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	89	145

External Links

No external refs found!

Bradi3g25670

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation