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  5. Bradi3g29287

Bradi3g29287


Description : dicer-like 3


Gene families : OG_42_0000292 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000292_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g29287
Cluster HCCA clusters: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
A4A49_16210 No alias ribonuclease 3-like protein 3 0.02 Orthogroups_2024-Update
At3g43920 No alias Endoribonuclease Dicer homolog 3... 0.03 Orthogroups_2024-Update
Bradi1g15440 No alias dicer-like 2 0.02 Orthogroups_2024-Update
Glyma.09G025400 No alias dicer-like 2 0.03 Orthogroups_2024-Update
Kfl00265_0060 kfl00265_0060_v1.1 (at1g01040 : 525.0) Encodes a Dicer homolog. Dicer is a... 0.01 Orthogroups_2024-Update
MA_10429839g0010 No alias (at3g03300 : 96.3) Encodes a Dicer-like protein that... 0.04 Orthogroups_2024-Update
PSME_00003728-RA No alias (at1g01040 : 178.0) Encodes a Dicer homolog. Dicer is a... 0.02 Orthogroups_2024-Update
Potri.008G075900 No alias dicer-like 2 0.03 Orthogroups_2024-Update
Potri.010G181400 No alias dicer-like 2 0.04 Orthogroups_2024-Update
Pp1s30_297V6 No alias dicer-like protein 0.02 Orthogroups_2024-Update
Sobic.001G527800.1 No alias endoribonuclease component *(DCL1) of DCL1-HYL1 miRNA... 0.03 Orthogroups_2024-Update
Sopen03g011680 No alias hypothetical protein 0.04 Orthogroups_2024-Update
Sopen08g021150 No alias Ribonuclease III domain 0.02 Orthogroups_2024-Update
Sopen10g001150 No alias Ribonuclease III domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0004525 ribonuclease III activity IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006396 RNA processing IEA InterProScan predictions
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005034 Dicer_dimerisation_dom 568 652
IPR001650 Helicase_C 382 497
IPR000999 RNase_III_dom 1261 1372
IPR000999 RNase_III_dom 1049 1183
IPR014720 dsRBD_dom 1400 1463
IPR011545 DEAD/DEAH_box_helicase_dom 28 164
IPR003100 PAZ_dom 878 1010
No external refs found!