Bradi3g29400

Description : RING/U-box superfamily protein

Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi3g29400
Cluster	HCCA clusters: Cluster_233

Target	Alias	Description	ECC score	Gene Family Method	Actions
MA_9328282g0010	No alias	(at5g01980 : 161.0) RING/U-box superfamily protein;...	0.03	Orthogroups_2024-Update
Potri.006G112100	No alias	RING/U-box superfamily protein	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
MF	GO:0061630	ubiquitin protein ligase activity	IEA	InterProScan predictions
MF	GO:0061659	ubiquitin-like protein ligase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003690	double-stranded DNA binding	IEP	Predicted GO
MF	GO:0030246	carbohydrate binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR039525	RNF126-like_zinc-ribbon	16	50
IPR001841	Znf_RING	232	274

External Links

No external refs found!