Description : Tetratricopeptide repeat (TPR)-like superfamily protein
Gene families : OG_42_0000146 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000146_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brachypodium release: Bradi3g30100 | |
Cluster | HCCA clusters: Cluster_59 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
420704 | No alias | PENTATRICOPEPTIDE REPEAT 596 | 0.02 | Orthogroups_2024-Update | |
At1g02370 | No alias | Pentatricopeptide repeat-containing protein At1g02370,... | 0.04 | Orthogroups_2024-Update | |
At1g80270 | No alias | PPR596 [Source:UniProtKB/TrEMBL;Acc:A0A178W3Z6] | 0.02 | Orthogroups_2024-Update | |
At5g09450 | No alias | Pentatricopeptide repeat-containing protein At5g09450,... | 0.02 | Orthogroups_2024-Update | |
Brara.F01064.1 | No alias | RNA editing factor *(POCO) | 0.02 | Orthogroups_2024-Update | |
Glyma.02G000600 | No alias | PENTATRICOPEPTIDE REPEAT 596 | 0.04 | Orthogroups_2024-Update | |
Glyma.19G129900 | No alias | PENTATRICOPEPTIDE REPEAT 596 | 0.03 | Orthogroups_2024-Update | |
HORVU1Hr1G045170.4 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Potri.009G030900 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Potri.013G133000 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Potri.016G036100 | No alias | PENTATRICOPEPTIDE REPEAT 596 | 0.02 | Orthogroups_2024-Update | |
Seita.4G018800.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.002G078100.1 | No alias | RNA editing factor *(POCO) | 0.03 | Orthogroups_2024-Update | |
Sobic.003G144000.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Solyc06g005140 | No alias | Pentatricopeptide repeat-containing family protein (AHRD... | 0.03 | Orthogroups_2024-Update | |
Sopen12g010730 | No alias | PPR repeat | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001522 | pseudouridine synthesis | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003747 | translation release factor activity | IEP | Predicted GO |
MF | GO:0003848 | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity | IEP | Predicted GO |
MF | GO:0005488 | binding | IEP | Predicted GO |
BP | GO:0006082 | organic acid metabolic process | IEP | Predicted GO |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006270 | DNA replication initiation | IEP | Predicted GO |
BP | GO:0006415 | translational termination | IEP | Predicted GO |
BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | Predicted GO |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
BP | GO:0006760 | folic acid-containing compound metabolic process | IEP | Predicted GO |
MF | GO:0008079 | translation termination factor activity | IEP | Predicted GO |
BP | GO:0009396 | folic acid-containing compound biosynthetic process | IEP | Predicted GO |
BP | GO:0009451 | RNA modification | IEP | Predicted GO |
MF | GO:0009982 | pseudouridine synthase activity | IEP | Predicted GO |
BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
MF | GO:0016778 | diphosphotransferase activity | IEP | Predicted GO |
MF | GO:0016866 | intramolecular transferase activity | IEP | Predicted GO |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | Predicted GO |
BP | GO:0022411 | cellular component disassembly | IEP | Predicted GO |
BP | GO:0032984 | protein-containing complex disassembly | IEP | Predicted GO |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0042398 | cellular modified amino acid biosynthetic process | IEP | Predicted GO |
BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0042559 | pteridine-containing compound biosynthetic process | IEP | Predicted GO |
BP | GO:0043436 | oxoacid metabolic process | IEP | Predicted GO |
BP | GO:0043624 | cellular protein complex disassembly | IEP | Predicted GO |
BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
No external refs found! |