Bradi3g33355

Description : Integrase-type DNA-binding superfamily protein

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi3g33355
Cluster	HCCA clusters: Cluster_12

Target	Alias	Description	ECC score	Gene Family Method
A4A49_02884	No alias	ethylene-responsive transcription factor 14	0.02	Orthogroups_2024-Update
Cre07.g353500	No alias	Integrase-type DNA-binding superfamily protein	0.01	Orthogroups_2024-Update
Glyma.16G147500	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
LOC_Os02g51670	No alias	ethylene-responsive transcription factor, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os06g09790	No alias	ethylene-responsive transcription factor, putative, expressed	0.02	Orthogroups_2024-Update
PSME_00051697-RA	No alias	(q40476\|erf1_tobac : 102.0) Ethylene-responsive...	0.02	Orthogroups_2024-Update
PSME_00055510-RA	No alias	(at1g19210 : 129.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
Potri.011G061800	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.019G073300	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Pp1s480_12V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Seita.8G173100.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.004G331300.2	No alias	subgroup ERF-V transcription factor	0.03	Orthogroups_2024-Update
Sobic.006G156100.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
Sobic.009G170800.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.03	Orthogroups_2024-Update
Sopen06g033990	No alias	AP2 domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	IEP	Predicted GO
CC	GO:0000152	nuclear ubiquitin ligase complex	IEP	Predicted GO
MF	GO:0003905	alkylbase DNA N-glycosylase activity	IEP	Predicted GO
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	Predicted GO
CC	GO:0005680	anaphase-promoting complex	IEP	Predicted GO
BP	GO:0006284	base-excision repair	IEP	Predicted GO
BP	GO:0006950	response to stress	IEP	Predicted GO
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	Predicted GO
MF	GO:0008725	DNA-3-methyladenine glycosylase activity	IEP	Predicted GO
BP	GO:0016311	dephosphorylation	IEP	Predicted GO
MF	GO:0016791	phosphatase activity	IEP	Predicted GO
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	Predicted GO
MF	GO:0019104	DNA N-glycosylase activity	IEP	Predicted GO
CC	GO:0031461	cullin-RING ubiquitin ligase complex	IEP	Predicted GO
MF	GO:0043733	DNA-3-methylbase glycosylase activity	IEP	Predicted GO
CC	GO:1990234	transferase complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	83	132

External Links

No external refs found!