Bradi3g35560


Description : related to AP2 4


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g35560
Cluster HCCA clusters: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
A4A49_38622 No alias dehydration-responsive element-binding protein 3 0.03 Orthogroups_2024-Update
At1g25470 No alias Ethylene-responsive transcription factor ERF116... 0.02 Orthogroups_2024-Update
At3g14230 No alias Ethylene-responsive transcription factor RAP2-2... 0.04 Orthogroups_2024-Update
At3g25890 No alias Ethylene-responsive transcription factor ERF119... 0.03 Orthogroups_2024-Update
At4g36900 No alias Ethylene-responsive transcription factor RAP2-10... 0.03 Orthogroups_2024-Update
Brara.C04274.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Brara.D02719.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Brara.G02403.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I02951.1 No alias subgroup ERF-VIII transcription factor 0.02 Orthogroups_2024-Update
Brara.J00210.1 No alias subgroup ERF-VIII transcription factor 0.02 Orthogroups_2024-Update
Brara.J01611.1 No alias transcription factor *(ERN1) & subgroup ERF-V... 0.02 Orthogroups_2024-Update
GRMZM2G084264 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G425798 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G035000 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.11G014800 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.16G147500 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.17G216100 No alias Integrase-type DNA-binding superfamily protein 0.06 Orthogroups_2024-Update
MA_113446g0010 No alias (at5g21960 : 132.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_2446g0010 No alias (at2g20880 : 136.0) Integrase-type DNA-binding... 0.03 Orthogroups_2024-Update
MA_45733g0020 No alias (at1g74930 : 120.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_83118g0010 No alias (at1g78080 : 90.5) Encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00005186-RA No alias (at4g17500 : 141.0) Encodes a member of the ERF... 0.02 Orthogroups_2024-Update
PSME_00037533-RA No alias (at5g61890 : 108.0) encodes a member of the ERF... 0.03 Orthogroups_2024-Update
PSME_00056324-RA No alias (at5g11590 : 111.0) encodes a member of the DREB... 0.05 Orthogroups_2024-Update
Potri.006G069400 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.014G099900 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.016G126100 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Pp1s133_11V6 No alias c-repeat binding factor 4 0.02 Orthogroups_2024-Update
Pp1s187_47V6 No alias dna binding 0.03 Orthogroups_2024-Update
Pp1s2_410V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Seita.1G341100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.2G112200.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.3G031600.1 No alias subgroup ERF-VIII transcription factor 0.02 Orthogroups_2024-Update
Seita.4G092200.1 No alias subgroup ERF-I transcription factor 0.03 Orthogroups_2024-Update
Seita.9G516500.1 No alias subgroup ERF-VII transcription factor 0.03 Orthogroups_2024-Update
Sobic.004G297100.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Sobic.006G058732.1 No alias subgroup ERF-X transcription factor 0.02 Orthogroups_2024-Update
Solyc08g066660 No alias Ethylene-responsive transcription factor TINY (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen07g027720 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen10g004900 No alias AP2 domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
MF GO:0008198 ferrous iron binding IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 98 146
No external refs found!