Bradi3g35850


Description : homeobox 1


Gene families : OG_42_0000105 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000105_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g35850
Cluster HCCA clusters: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
Bradi1g73190 No alias Homeobox-leucine zipper protein family 0.02 Orthogroups_2024-Update
Brara.A03941.1 No alias HD-ZIP I/II-type transcription factor 0.02 Orthogroups_2024-Update
Brara.B03948.1 No alias HD-ZIP I/II-type transcription factor 0.03 Orthogroups_2024-Update
Brara.E03658.1 No alias HD-ZIP I/II-type transcription factor 0.04 Orthogroups_2024-Update
Brara.G00177.1 No alias HD-ZIP I/II-type transcription factor 0.02 Orthogroups_2024-Update
Glyma.02G019100 No alias Homeobox-leucine zipper protein family 0.02 Orthogroups_2024-Update
Glyma.11G064800 No alias homeobox protein 40 0.03 Orthogroups_2024-Update
Glyma.16G021000 No alias homeobox 7 0.02 Orthogroups_2024-Update
LOC_Os03g10210 No alias homeobox domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_10428916g0010 No alias (at3g01470 : 117.0) Encodes a homeodomain leucine zipper... 0.03 Orthogroups_2024-Update
MA_19453g0040 No alias (at3g01470 : 183.0) Encodes a homeodomain leucine zipper... 0.03 Orthogroups_2024-Update
MA_3951g0010 No alias (at1g69780 : 143.0) Encodes a homeodomain leucine zipper... 0.02 Orthogroups_2024-Update
PSME_00028456-RA No alias (at1g69780 : 114.0) Encodes a homeodomain leucine zipper... 0.02 Orthogroups_2024-Update
Pp1s28_54V6 No alias af402605_1homeodomain leucine zipper protein hdz2 0.02 Orthogroups_2024-Update
Seita.2G193200.1 No alias HD-ZIP I/II-type transcription factor 0.03 Orthogroups_2024-Update
Solyc02g087840 No alias Homeobox associated leucine zipper protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc06g053220 No alias Homeobox leucine zipper protein (AHRD V3.3 *** B8YIB0_MIRJA) 0.03 Orthogroups_2024-Update
Sopen01g006250 No alias Homeobox domain 0.02 Orthogroups_2024-Update
Sopen02g031700 No alias Homeobox domain 0.03 Orthogroups_2024-Update
Sopen03g006900 No alias Homeobox domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
MF GO:0043565 sequence-specific DNA binding IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0001671 ATPase activator activity IEP Predicted GO
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005787 signal peptidase complex IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0006528 asparagine metabolic process IEP Predicted GO
BP GO:0006529 asparagine biosynthetic process IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 76 130
IPR003106 Leu_zip_homeo 131 172
No external refs found!