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  5. Bradi3g37800

Bradi3g37800


Description : RING/U-box superfamily protein


Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g37800
Cluster HCCA clusters: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
129201 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
A4A49_11116 No alias putative e3 ubiquitin-protein ligase rhc1a 0.01 Orthogroups_2024-Update
A4A49_24130 No alias e3 ubiquitin-protein ligase ring1-like protein 0.02 Orthogroups_2024-Update
At3g02340 No alias At3g02340 [Source:UniProtKB/TrEMBL;Acc:Q9FWA5] 0.02 Orthogroups_2024-Update
At3g13228 No alias RING/U-box superfamily protein... 0.02 Orthogroups_2024-Update
At5g64920 No alias CIP8 [Source:UniProtKB/TrEMBL;Acc:A0A178UJC6] 0.01 Orthogroups_2024-Update
Bradi1g20480 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
Bradi3g56300 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Brara.A02841.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Brara.C02094.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.G02768.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I03147.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Brara.I03890.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.I04140.1 No alias Unknown function 0.01 Orthogroups_2024-Update
GRMZM2G164358 No alias RING-H2 finger C1A 0.01 Orthogroups_2024-Update
Glyma.04G251600 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.05G017500 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.17G082500 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
HORVU0Hr1G002870.3 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU0Hr1G019650.1 No alias Unknown function 0.01 Orthogroups_2024-Update
HORVU5Hr1G051760.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os02g09820 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g26420 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g43740 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g36170 No alias cytokinesis negative regulator RCP1, putative, expressed 0.01 Orthogroups_2024-Update
LOC_Os09g06770 No alias RING finger protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g04281 No alias zinc finger, C3HC4 type domain containing protein 0.02 Orthogroups_2024-Update
LOC_Os11g04680 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g02620 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.01 Orthogroups_2024-Update
MA_219769g0010 No alias (at5g20910 : 155.0) RING/U-box superfamily protein;... 0.01 Orthogroups_2024-Update
MA_79051g0010 No alias (at3g19950 : 171.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
Potri.001G103900 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.003G145800 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
Potri.005G062400 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.006G112100 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.008G087200 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.012G065300 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
Seita.1G054700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.2G181600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.8G172700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.005G165900.1 No alias Unknown function 0.08 Orthogroups_2024-Update
Solyc01g104260 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc08g067290 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT5G20910.1) 0.07 Orthogroups_2024-Update
Solyc12g008480 No alias RING/U-box superfamily protein (AHRD V3.3 *-* AT1G60360.1) 0.03 Orthogroups_2024-Update
Sopen01g012080 No alias Ring finger domain 0.02 Orthogroups_2024-Update
Sopen03g029300 No alias Ring finger domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR039525 RNF126-like_zinc-ribbon 30 65
IPR001841 Znf_RING 169 210
No external refs found!