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  5. Solyc01g010970

Solyc01g010970


Description : Argonaute7


Gene families : OG_42_0000134 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000134_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g010970
Cluster HCCA clusters: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
Bradi2g10370 No alias Argonaute family protein 0.02 Orthogroups_2024-Update
Bradi3g51077 No alias Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.03 Orthogroups_2024-Update
Kfl00085_0250 kfl00085_0250_v1.... (at1g48410 : 963.0) Encodes an RNA Slicer that... 0.02 Orthogroups_2024-Update
MA_10427420g0010 No alias (at1g48410 : 253.0) Encodes an RNA Slicer that... 0.03 Orthogroups_2024-Update
Seita.2G310800.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.001G136000.4 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.009G003700.1 No alias miRNA recruiting factor (AGO) of RNA-induced silencing... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Predicted GO
BP GO:0000077 DNA damage checkpoint IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003689 DNA clamp loader activity IEP Predicted GO
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005663 DNA replication factor C complex IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
MF GO:0016229 steroid dehydrogenase activity IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
CC GO:0030896 checkpoint clamp complex IEP Predicted GO
BP GO:0031570 DNA integrity checkpoint IEP Predicted GO
MF GO:0033170 protein-DNA loading ATPase activity IEP Predicted GO
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
BP GO:0043085 positive regulation of catalytic activity IEP Predicted GO
BP GO:0044093 positive regulation of molecular function IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0045786 negative regulation of cell cycle IEP Predicted GO
BP GO:0048523 negative regulation of cellular process IEP Predicted GO
BP GO:0050790 regulation of catalytic activity IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
InterPro domains Description Start Stop
IPR003100 PAZ_dom 367 489
IPR014811 ArgoL1 306 354
IPR032472 ArgoL2 499 545
IPR032474 Argonaute_N 149 295
IPR003165 Piwi 653 959
No external refs found!