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  5. Bradi3g48180

Bradi3g48180


Description : salt tolerance homologue


Gene families : OG_42_0004508 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004508_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g48180
Cluster HCCA clusters: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
271535 No alias light-regulated zinc finger protein 1 0.02 Orthogroups_2024-Update
At1g06040 No alias B-box zinc finger protein 24... 0.04 Orthogroups_2024-Update
At2g31380 No alias B-box zinc finger protein 25... 0.03 Orthogroups_2024-Update
Brara.H02976.1 No alias BBX class-IV transcription factor 0.04 Orthogroups_2024-Update
Brara.I05427.1 No alias BBX class-IV transcription factor 0.03 Orthogroups_2024-Update
Brara.J00413.1 No alias BBX class-IV transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G019335 No alias salt tolerance homologue 0.02 Orthogroups_2024-Update
Glyma.12G051700 No alias B-box zinc finger family protein 0.03 Orthogroups_2024-Update
Glyma.15G029500 No alias B-box zinc finger family protein 0.05 Orthogroups_2024-Update
HORVU2Hr1G085000.2 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os02g39360 No alias B-box zinc finger family protein, putative, expressed 0.05 Orthogroups_2024-Update
Potri.017G028300 No alias B-box zinc finger family protein 0.04 Orthogroups_2024-Update
Pp1s509_13V6 No alias zinc finger 0.05 Orthogroups_2024-Update
Seita.1G225000.1 No alias BBX class-IV transcription factor 0.03 Orthogroups_2024-Update
Sobic.004G208400.1 No alias BBX class-IV transcription factor 0.03 Orthogroups_2024-Update
Sopen06g029550 No alias B-box zinc finger 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004096 catalase activity IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016851 magnesium chelatase activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Predicted GO
BP GO:0042126 nitrate metabolic process IEP Predicted GO
BP GO:0042128 nitrate assimilation IEP Predicted GO
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Predicted GO
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0071941 nitrogen cycle metabolic process IEP Predicted GO
BP GO:2001057 reactive nitrogen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000315 Znf_B-box 55 96
No external refs found!