Bradi3g51510

Description : Dof-type zinc finger DNA-binding family protein

Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi3g51510
Cluster	HCCA clusters: Cluster_183

Target	Alias	Description	ECC score	Gene Family Method
A4A49_15151	No alias	dof zinc finger protein dof2.4	0.02	Orthogroups_2024-Update
A4A49_24184	No alias	dof zinc finger protein dof3.1	0.04	Orthogroups_2024-Update
A4A49_34579	No alias	dof zinc finger protein pbf	0.02	Orthogroups_2024-Update
A4A49_35213	No alias	dof zinc finger protein dof1.7	0.02	Orthogroups_2024-Update
AC155434.2_FG006	No alias	cycling DOF factor 3	0.03	Orthogroups_2024-Update
At1g69570	No alias	Cyclic dof factor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SEZ3]	0.02	Orthogroups_2024-Update
At2g34140	No alias	Cyclic dof factor 4 [Source:UniProtKB/Swiss-Prot;Acc:O22967]	0.04	Orthogroups_2024-Update
At5g39660	No alias	Cyclic dof factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZL5]	0.02	Orthogroups_2024-Update
At5g60850	No alias	OBP4 [Source:UniProtKB/TrEMBL;Acc:A0A178UF84]	0.02	Orthogroups_2024-Update
At5g62430	No alias	Cyclic dof factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1E3]	0.03	Orthogroups_2024-Update
Bradi1g03710	No alias	OBF-binding protein 3	0.02	Orthogroups_2024-Update
Bradi3g25670	No alias	cycling DOF factor 1	0.03	Orthogroups_2024-Update
Brara.B00052.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Brara.E02083.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.G01458.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Brara.I00873.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
GRMZM2G146283	No alias	TARGET OF MONOPTEROS 6	0.02	Orthogroups_2024-Update
Glyma.01G021100	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
Glyma.01G049400	No alias	cycling DOF factor 3	0.03	Orthogroups_2024-Update
Glyma.02G108600	No alias	cycling DOF factor 2	0.05	Orthogroups_2024-Update
Glyma.04G233300	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.05G025900	No alias	cycling DOF factor 3	0.04	Orthogroups_2024-Update
Glyma.05G158200	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
Glyma.07G193900	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
Glyma.07G229600	No alias	cycling DOF factor 2	0.05	Orthogroups_2024-Update
Glyma.08G228900	No alias	cycling DOF factor 1	0.02	Orthogroups_2024-Update
Glyma.08G358100	No alias	DNA binding with one finger 2.4	0.02	Orthogroups_2024-Update
Glyma.10G173700	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
Glyma.13G062500	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
Glyma.13G230200	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.13G237500	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
Glyma.13G241900	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.15G022800	No alias	DOF zinc finger protein 1	0.01	Orthogroups_2024-Update
Glyma.15G071400	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.17G180600	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
Glyma.18G260500	No alias	cycling DOF factor 2	0.02	Orthogroups_2024-Update
Glyma.19G257500	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
Glyma.20G035200	No alias	cycling DOF factor 2	0.02	Orthogroups_2024-Update
HORVU1Hr1G074140.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
HORVU2Hr1G119160.3	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
HORVU3Hr1G072970.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
LOC_Os01g55340	No alias	dof zinc finger domain containing protein, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os07g48570	No alias	expressed protein	0.03	Orthogroups_2024-Update
MA_97259g0020	No alias	(at5g62430 : 134.0) Dof-type zinc finger...	0.03	Orthogroups_2024-Update
Mp2g20790.1	No alias	transcription factor (DOF)	0.03	Orthogroups_2024-Update
PSME_00004776-RA	No alias	(at5g60850 : 127.0) Encodes a zinc finger protein.; OBF...	0.03	Orthogroups_2024-Update
PSME_00020524-RA	No alias	(at5g62940 : 135.0) HCA2 induces the formation of...	0.02	Orthogroups_2024-Update
PSME_00041316-RA	No alias	(at5g39660 : 139.0) Dof-type zinc finger...	0.04	Orthogroups_2024-Update
PSME_00052342-RA	No alias	(at5g62940 : 135.0) HCA2 induces the formation of...	0.02	Orthogroups_2024-Update
PSME_00056872-RA	No alias	(at5g60200 : 116.0) Encodes a Dof-type transcription...	0.03	Orthogroups_2024-Update
Potri.004G046100	No alias	OBF binding protein 4	0.03	Orthogroups_2024-Update
Potri.004G121800	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
Potri.008G055100	No alias	OBF-binding protein 3	0.02	Orthogroups_2024-Update
Pp1s124_139V6	No alias	zinc finger	0.03	Orthogroups_2024-Update
Pp1s12_364V6	No alias	zinc finger	0.02	Orthogroups_2024-Update
Pp1s170_42V6	No alias	f-box family protein	0.02	Orthogroups_2024-Update
Pp1s199_87V6	No alias	cycling dof factor 2	0.02	Orthogroups_2024-Update
Seita.1G290700.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Seita.2G436800.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Seita.5G052700.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Seita.6G192200.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Seita.9G206300.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Seita.9G525000.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
Sobic.002G421900.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Solyc02g067230	No alias	Dof zinc finger protein3	0.03	Orthogroups_2024-Update
Solyc11g066050	No alias	LOW QUALITY:Dof zinc finger protein (AHRD V3.3 *** Q9M4G1_SOLTU)	0.02	Orthogroups_2024-Update
Sopen02g015430	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update
Sopen02g021750	No alias	Dof domain, zinc finger	0.03	Orthogroups_2024-Update
Sopen02g022800	No alias	Dof domain, zinc finger	0.03	Orthogroups_2024-Update
Sopen05g032990	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update
Sopen06g027770	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update
Sopen08g004350	No alias	Dof domain, zinc finger	0.03	Orthogroups_2024-Update
Sopen09g005390	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0005215	transporter activity	IEP	Predicted GO
MF	GO:0005509	calcium ion binding	IEP	Predicted GO
MF	GO:0005544	calcium-dependent phospholipid binding	IEP	Predicted GO
BP	GO:0006810	transport	IEP	Predicted GO
MF	GO:0008198	ferrous iron binding	IEP	Predicted GO
BP	GO:0008272	sulfate transport	IEP	Predicted GO
MF	GO:0008519	ammonium transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015116	sulfate transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015696	ammonium transport	IEP	Predicted GO
CC	GO:0016020	membrane	IEP	Predicted GO
MF	GO:0016853	isomerase activity	IEP	Predicted GO
MF	GO:0016892	endoribonuclease activity, producing 3'-phosphomonoesters	IEP	Predicted GO
MF	GO:0016894	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters	IEP	Predicted GO
MF	GO:0022857	transmembrane transporter activity	IEP	Predicted GO
MF	GO:0033897	ribonuclease T2 activity	IEP	Predicted GO
MF	GO:0043169	cation binding	IEP	Predicted GO
MF	GO:0046872	metal ion binding	IEP	Predicted GO
MF	GO:0050664	oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor	IEP	Predicted GO
BP	GO:0051179	localization	IEP	Predicted GO
BP	GO:0051234	establishment of localization	IEP	Predicted GO
MF	GO:0061630	ubiquitin protein ligase activity	IEP	Predicted GO
MF	GO:0061659	ubiquitin-like protein ligase activity	IEP	Predicted GO
MF	GO:0071949	FAD binding	IEP	Predicted GO
BP	GO:0072348	sulfur compound transport	IEP	Predicted GO
MF	GO:1901682	sulfur compound transmembrane transporter activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	76	132

External Links

No external refs found!

Bradi3g51510

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation