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  5. Bradi3g56470

Bradi3g56470


Description : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein


Gene families : OG_42_0005147 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005147_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g56470
Cluster HCCA clusters: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
437511 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.02 Orthogroups_2024-Update
At4g26600 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.11 Orthogroups_2024-Update
Brara.A01647.1 No alias rRNA methyltransferase *(NOP2) 0.09 Orthogroups_2024-Update
Brara.B01299.1 No alias rRNA methyltransferase *(NOP2) 0.06 Orthogroups_2024-Update
Brara.J01029.1 No alias rRNA methyltransferase *(NOP2) 0.05 Orthogroups_2024-Update
Cre06.g273413 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.15 Orthogroups_2024-Update
Glyma.08G332000 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.12 Orthogroups_2024-Update
Glyma.18G075000 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.1 Orthogroups_2024-Update
HORVU6Hr1G072030.1 No alias rRNA methyltransferase *(NOP2) 0.18 Orthogroups_2024-Update
Kfl00342_0080 kfl00342_0080_v1.1 (at4g26600 : 543.0) S-adenosyl-L-methionine-dependent... 0.06 Orthogroups_2024-Update
LOC_Os09g37860 No alias NOL1/NOP2/sun family protein, putative, expressed 0.08 Orthogroups_2024-Update
Mp6g04100.1 No alias OLI2 LSU processome maturation factor 0.04 Orthogroups_2024-Update
Potri.001G369600 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.16 Orthogroups_2024-Update
Pp1s230_76V6 No alias nucleolar protein 120kda 0.04 Orthogroups_2024-Update
Seita.1G301700.1 No alias rRNA methyltransferase *(NOP2) 0.19 Orthogroups_2024-Update
Sobic.004G256000.1 No alias rRNA methyltransferase *(NOP2) 0.21 Orthogroups_2024-Update
Solyc07g052110 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.07 Orthogroups_2024-Update
Sopen07g025740 No alias NOL1/NOP2/sun family 0.03 Orthogroups_2024-Update
evm.model.contig_2251.1 No alias (at5g55920 : 395.0) Encodes a homolog of the S.... 0.09 Orthogroups_2024-Update
evm.model.tig00000114.21 No alias (at4g26600 : 466.0) S-adenosyl-L-methionine-dependent... 0.13 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003989 acetyl-CoA carboxylase activity IEP Predicted GO
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Predicted GO
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008175 tRNA methyltransferase activity IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016421 CoA carboxylase activity IEP Predicted GO
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001678 MeTrfase_RsmB/NOP2 329 539
IPR031341 Methyltr_RsmF_N 238 325
No external refs found!