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  5. Bradi3g58980

Bradi3g58980


Description : Integrase-type DNA-binding superfamily protein


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g58980
Cluster HCCA clusters: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
A4A49_05036 No alias ethylene-responsive transcription factor 3 0.02 Orthogroups_2024-Update
A4A49_16905 No alias ethylene-responsive transcription factor 5 0.02 Orthogroups_2024-Update
A4A49_21979 No alias ethylene-responsive transcription factor erf034 0.03 Orthogroups_2024-Update
A4A49_35008 No alias dehydration-responsive element-binding protein 3 0.02 Orthogroups_2024-Update
At2g44940 No alias Ethylene-responsive transcription factor ERF034... 0.02 Orthogroups_2024-Update
At5g19790 No alias Ethylene-responsive transcription factor RAP2-11... 0.02 Orthogroups_2024-Update
Bradi2g22505 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Brara.A01769.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.02 Orthogroups_2024-Update
Brara.C03562.1 No alias subgroup ERF-VIII transcription factor 0.02 Orthogroups_2024-Update
Brara.F00133.1 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
Brara.F00298.1 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
Brara.F03559.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Brara.H00930.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Brara.H01375.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.H01777.1 No alias subgroup ERF-I transcription factor 0.03 Orthogroups_2024-Update
Brara.J00058.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Brara.J02528.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Cre16.g674890 No alias cytokinin response factor 2 0.02 Orthogroups_2024-Update
GRMZM2G039112 No alias related to AP2 11 0.02 Orthogroups_2024-Update
Glyma.04G251400 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G156200 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.08G257300 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G014800 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G239200 No alias related to AP2 4 0.03 Orthogroups_2024-Update
Glyma.18G252400 No alias ethylene-responsive element binding factor 13 0.03 Orthogroups_2024-Update
Glyma.19G142000 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
LOC_Os05g28350 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g40150 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g39850 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
Mp1g20040.1 No alias transcription factor (ERF) 0.02 Orthogroups_2024-Update
PSME_00003641-RA No alias (at3g14230 : 136.0) encodes a member of the ERF... 0.03 Orthogroups_2024-Update
Potri.005G176000 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Seita.6G235100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G516800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G378900.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G381400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G073100.1 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
Sopen06g024300 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen07g024840 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen08g028640 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen12g022660 No alias AP2 domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006814 sodium ion transport IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 156 204
No external refs found!