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  5. Bradi3g59520

Bradi3g59520


Description : Auxin efflux carrier family protein


Gene families : OG_42_0000235 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000235_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi3g59520
Cluster HCCA clusters: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
99301 No alias Auxin efflux carrier family protein 0.03 Orthogroups_2024-Update
A4A49_08912 No alias auxin efflux carrier component 5 0.03 Orthogroups_2024-Update
A4A49_35848 No alias hypothetical protein 0.03 Orthogroups_2024-Update
At1g70940 No alias Auxin efflux carrier component 3... 0.03 Orthogroups_2024-Update
Brara.J01877.1 No alias auxin transporter *(PIN) & auxin efflux transporter *(PIN) 0.02 Orthogroups_2024-Update
Glyma.09G117900 No alias Auxin efflux carrier family protein 0.02 Orthogroups_2024-Update
Glyma.09G176300 No alias Auxin efflux carrier family protein 0.03 Orthogroups_2024-Update
Glyma.17G057300 No alias Auxin efflux carrier family protein 0.03 Orthogroups_2024-Update
Glyma.18G255800 No alias Auxin efflux carrier family protein 0.03 Orthogroups_2024-Update
MA_100472g0010 No alias (at1g70940 : 793.0) A regulator of auxin efflux and... 0.04 Orthogroups_2024-Update
Mp3g21660.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Orthogroups_2024-Update
PSME_00001452-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00016874-RA No alias (at1g70940 : 775.0) A regulator of auxin efflux and... 0.02 Orthogroups_2024-Update
PSME_00020548-RA No alias (at5g57090 : 686.0) Encodes an auxin efflux carrier that... 0.03 Orthogroups_2024-Update
PSME_00044024-RA No alias (at1g70940 : 589.0) A regulator of auxin efflux and... 0.04 Orthogroups_2024-Update
Potri.018G139400 No alias Auxin efflux carrier family protein 0.03 Orthogroups_2024-Update
Seita.1G317400.1 No alias auxin efflux transporter *(PIN) & auxin transporter *(PIN) 0.03 Orthogroups_2024-Update
Seita.4G101300.1 No alias auxin efflux transporter *(PIN) & auxin transporter *(PIN) 0.03 Orthogroups_2024-Update
Seita.5G241500.1 No alias auxin efflux transporter *(PIN) & auxin transporter *(PIN) 0.02 Orthogroups_2024-Update
Sobic.010G095100.1 No alias auxin transporter *(PIN) & auxin efflux transporter *(PIN) 0.02 Orthogroups_2024-Update
Solyc10g080880 No alias SlPIN7 0.02 Orthogroups_2024-Update
Sopen05g003900 No alias Membrane transport protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004097 catechol oxidase activity IEP Predicted GO
MF GO:0004564 beta-fructofuranosidase activity IEP Predicted GO
MF GO:0004575 sucrose alpha-glucosidase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
MF GO:0015926 glucosidase activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0090599 alpha-glucosidase activity IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004776 Mem_trans 9 595
No external refs found!